RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ADAT2Q7Z6V5 191 aaKnown RBP16.09■□□□□ 0.17
HDAC4-213ENST00000496347 OR14C36Q8NHC7 312 aa16.09■□□□□ 0.17
HDAC4-213ENST00000496347 TBC1D31Q96DN5 1066 aa16.09■□□□□ 0.17
HDAC4-213ENST00000496347 CNTNAP3BQ96NU0 1288 aa16.09■□□□□ 0.17
HDAC4-213ENST00000496347 MCEEQ96PE7 176 aa16.09■□□□□ 0.17
HDAC4-213ENST00000496347 ACE2Q9BYF1 805 aaPredicted RBP16.09■□□□□ 0.17
HDAC4-213ENST00000496347 CNTNAP3Q9BZ76 1288 aa16.09■□□□□ 0.17
HDAC4-213ENST00000496347 ATP13A1Q9HD20 1204 aa16.09■□□□□ 0.17
HDAC4-213ENST00000496347 AKAP13Q12802 2813 aa16.09■□□□□ 0.17
HDAC4-213ENST00000496347 FREM2Q5SZK8 3169 aa16.08■□□□□ 0.17
HDAC4-213ENST00000496347 LRRC53A6NM62 1247 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 CBX4O00257 560 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 VILLO15195 856 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 LRIG2O94898 1065 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 GJB6O95452 261 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 MT-CO1P00395 513 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 PRNPP04156 253 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 RHOQP17081 205 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 PTMSP20962 102 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 RRM1P23921 792 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 GEMIN4P57678 1058 aaKnown RBP16.08■□□□□ 0.16
HDAC4-213ENST00000496347 SIM1P81133 766 aaPredicted RBP16.08■□□□□ 0.16
HDAC4-213ENST00000496347 SLC20A2Q08357 652 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 KIF19Q2TAC6 998 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 EFHC2Q5JST6 749 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 PPP1R15BQ5SWA1 713 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 IRF2BP2Q7Z5L9 587 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 PHLDB2Q86SQ0 1253 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 NLRP14Q86W24 1093 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 TRIM69Q86WT6 500 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 DRC7Q8IY82 874 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 CCDC185Q8N715 623 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 OR7D4Q8NG98 312 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 OR2A12Q8NGT7 310 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 PIP4K2CQ8TBX8 421 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 SKA1Q96BD8 255 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 VCPIP1Q96JH7 1222 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 TMEM248Q9NWD8 314 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 SARDHQ9UL12 918 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 ANKRD6Q9Y2G4 727 aa16.08■□□□□ 0.16
HDAC4-213ENST00000496347 WDFY3Q8IZQ1 3526 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 FLRT2O43155 660 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 CCP110O43303 1012 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 DFNA5O60443 496 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 ZMPSTE24O75844 475 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 PLEKP08567 350 aaPredicted RBP16.07■□□□□ 0.16
HDAC4-213ENST00000496347 RECQLP46063 649 aaPredicted RBP16.07■□□□□ 0.16
HDAC4-213ENST00000496347 CCT8P50990 548 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 METAP1P53582 386 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 TPM4P67936 248 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 CCDC15Q0P6D6 951 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 IQCB1Q15051 598 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 ASIC2Q16515 512 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 ZNF423Q2M1K9 1284 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 RAB6CQ53S08 254 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 ACAD10Q6JQN1 1059 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 RWDD4Q6NW29 188 aaKnown RBP16.07■□□□□ 0.16
HDAC4-213ENST00000496347 WDR59Q6PJI9 974 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 LINGO4Q6UY18 593 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 MCOLN2Q8IZK6 566 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 PCDH20Q8N6Y1 951 aaKnown RBP16.07■□□□□ 0.16
HDAC4-213ENST00000496347 TMIEQ8NEW7 156 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 PPP1R16AQ96I34 528 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 SLC6A18Q96N87 628 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 CNPY3Q9BT09 278 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 EDEM3Q9BZQ6 932 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 TTYH3Q9C0H2 523 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 RAB6CQ9H0N0 254 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 IL21RQ9HBE5 538 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 PREBQ9HCU5 417 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 TM7SF3Q9NS93 570 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 WASF3Q9UPY6 502 aa16.07■□□□□ 0.16
HDAC4-213ENST00000496347 COL5A1P20908 1838 aaPredicted RBP16.06■□□□□ 0.16
HDAC4-213ENST00000496347 SPAARA0A1B0GVQ0 90 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 SYCE3A1L190 88 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 K7ERQ8 282 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 BNIP3LO60238 219 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 SH3BP5O60239 455 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 RAMP2O60895 175 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 RTN2O75298 545 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 TRIM16O95361 564 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 CTSLP07711 333 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 L1CAMP32004 1257 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 CHRNA3P32297 505 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 PRKCIP41743 596 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 CTSKP43235 329 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 C21orf59P57076 290 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 PPP2CBP62714 309 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 PPP2CAP67775 309 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 ARF5P84085 180 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 CNTN1Q12860 1018 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 FOXC1Q12948 553 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 INAVAQ3KP66 663 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 SLC45A4Q5BKX6 768 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 FIGNQ5HY92 759 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 SFMBT2Q5VUG0 894 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 NAPEPLDQ6IQ20 393 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 DCUN1D2Q6PH85 259 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 LAYNQ6UX15 382 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms