RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 RTN4RL1Q86UN2 441 aaPredicted RBP7.06□□□□□ -1.28
USP39-219ENST00000496047 LRRTM3Q86VH5 581 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 CHSY1Q86X52 802 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 C10orf67Q8IYJ2 551 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 MICALL1Q8N3F8 863 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 BANPQ8N9N5 519 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 ZNF511Q8NB15 262 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 SCAMP5Q8TAC9 235 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 TCP10LQ8TDR4 215 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 CASP10Q92851 521 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 FATE1Q969F0 183 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 ZNF669Q96BR6 464 aaPredicted RBP7.06□□□□□ -1.28
USP39-219ENST00000496047 TMEM169Q96HH4 297 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 FCRL2Q96LA5 508 aaPredicted RBP7.06□□□□□ -1.28
USP39-219ENST00000496047 SIGLEC10Q96LC7 697 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 TEKT5Q96M29 485 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 AGAP3Q96P47 875 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 PGLYRP2Q96PD5 576 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 DEFB118Q96PH6 123 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 TBL1YQ9BQ87 522 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 MLXIPLQ9NP71 852 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 PAK6Q9NQU5 681 aaPredicted RBP7.06□□□□□ -1.28
USP39-219ENST00000496047 ENTPD7Q9NQZ7 604 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 MARCH2Q9P0N8 246 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 GMIPQ9P107 970 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 HSFX1Q9UBD0 423 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 PPARGC1AQ9UBK2 798 aaKnown RBP7.06□□□□□ -1.28
USP39-219ENST00000496047 UXTQ9UBK9 157 aaPredicted RBP7.06□□□□□ -1.28
USP39-219ENST00000496047 DNAJB4Q9UDY4 337 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 SFMBT1Q9UHJ3 866 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 OGDHLQ9ULD0 1010 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 GRID1Q9ULK0 1009 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 PHTF1Q9UMS5 762 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 SSX2IPQ9Y2D8 614 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 HBS1LQ9Y450 684 aaKnown RBP7.06□□□□□ -1.28
USP39-219ENST00000496047 USH1CQ9Y6N9 552 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 RPS6KL1Q9Y6S9 549 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 COL6A3P12111 3177 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 ZNF106Q9H2Y7 1883 aaKnown RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 FAM237BA0A1B0GVD1 139 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 SLC12A8A0AV02 714 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 CFAP73A6NFT4 308 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 MSI1O43347 362 aaKnown RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 LZTS3O60299 673 aaPredicted RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 HNRNPCL1O60812 293 aaKnown RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 AVILO75366 819 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 FAM155BO75949 473 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 WFS1O76024 890 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 ALDH1A2O94788 518 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 FSBPO95073 299 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 CXCL10P02778 98 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 URODP06132 367 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 ATP5BP06576 529 aaKnown RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 APOA4P06727 396 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 GALTP07902 379 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 CCL5P13501 91 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 CCNB1P14635 433 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 LAG3P18627 525 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 ELF1P32519 619 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 RPA3P35244 121 aaPredicted RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 PPM1AP35813 382 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 ETFBP38117 255 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 ALDH1A3P47895 512 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 SLC11A2P49281 568 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 HARS2P49590 506 aaKnown RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 TUBP50607 506 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 RASSF2P50749 326 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 NRLP54845 237 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 YBEYP58557 167 aaPredicted RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 PPARDQ03181 441 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 CCDC15Q0P6D6 951 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 FAAP100Q0VG06 881 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 MTM1Q13496 603 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 MRPL58Q14197 206 aaKnown RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 DDR2Q16832 855 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 PARP15Q460N3 678 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 LACTB2Q53H82 288 aaPredicted RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 TAF1BQ53T94 588 aaPredicted RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 LCE2AQ5TA79 106 aaPredicted RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 TMCO4Q5TGY1 634 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 MANEALQ5VSG8 457 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 TPGS2Q68CL5 300 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 RNF43Q68DV7 783 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 KYAT3Q6YP21 454 aaKnown RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 TIFABQ6ZNK6 161 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 FAM47EQ6ZV65 393 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 ANKRD33Q7Z3H0 272 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 KCNMB4Q86W47 210 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 CCDC33Q8N5R6 958 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 NPWQ8N729 165 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 OR52K1Q8NGK4 314 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 CALML6Q8TD86 181 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 PLD4Q96BZ4 506 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 CELF6Q96J87 481 aaKnown RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 ZNF558Q96NG5 402 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 TOX2Q96NM4 488 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 FCRL5Q96RD9 977 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 SIKE1Q9BRV8 207 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 FAM167BQ9BTA0 163 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 TSSK1BQ9BXA7 367 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms