RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 AKAP9Q99996 3911 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 KIF26BQ2KJY2 2108 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 PDZD2O15018 2839 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 D6RAR5 112 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 SLC31A1O15431 190 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 AQP9O43315 295 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 CNTN5O94779 1100 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 PRLRP16471 622 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 TRIM21P19474 475 aaKnown RBP9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 ITIH1P19827 911 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 CD70P32970 193 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 NOS2P35228 1153 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 DRD3P35462 400 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 TRPC3Q13507 836 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 ELAVL3Q14576 367 aaKnown RBP9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 ARID5BQ14865 1188 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 ANKRD1Q15327 319 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 L1TD1Q5T7N2 865 aaKnown RBP9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 RNF219Q5W0B1 726 aaPredicted RBP9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 PTAR1Q7Z6K3 402 aaPredicted RBP9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 ACOT1Q86TX2 421 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 SFR1Q86XK3 245 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 STK40Q8N2I9 435 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 KDM1BQ8NB78 822 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 RASSF8Q8NHQ8 419 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 JPH3Q8WXH2 748 aaPredicted RBP9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 CALML4Q96GE6 196 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 ABHD17AQ96GS6 310 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 FRMD6Q96NE9 622 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 GFM1Q96RP9 751 aaKnown RBP9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 SRRTQ9BXP5 876 aaKnown RBP9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 SMYD3Q9H7B4 428 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 CAAP1Q9H8G2 361 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 FOXJ2Q9P0K8 574 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 G3BP2Q9UN86 482 aaKnown RBP9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 CEP83Q9Y592 693 aa9.92□□□□□ -0.82
SMARCAL1-213ENST00000496037 CSMD2Q7Z408 3487 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 VWA3AA6NCI4 1184 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 WIPF3A6NGB9 483 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 ZNF233A6NK53 670 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 A6NNZ2 444 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 ZNF891A8MT65 544 aaPredicted RBP9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 TTC34A8MYJ7 566 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 STMND1H3BQB6 276 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 NTN3O00634 580 aaPredicted RBP9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 TPP1O14773 563 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 KIAA0391O15091 583 aaKnown RBP9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 CASC3O15234 703 aaKnown RBP9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 GCNT3O95395 438 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 CLDN1O95832 211 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 DLATP10515 647 aaKnown RBP9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 NME1P15531 152 aaKnown RBP9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 HNRNPA2B1P22626 353 aaKnown RBP9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 ADORA2BP29275 332 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 CCKBRP32239 447 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 CSKP41240 450 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 MAPK10P53779 464 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 BIRC2Q13490 618 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 SEPT6Q14141 434 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 CCDC186Q7Z3E2 898 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 PARGQ86W56 976 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 DCP2Q8IU60 420 aaKnown RBP9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 MFN1Q8IWA4 741 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 SLC22A18ASQ8N1D0 253 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 IL22RA1Q8N6P7 574 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 LMX1AQ8TE12 382 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 HPS1Q92902 700 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 USP7Q93009 1102 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 SYAP1Q96A49 352 aaPredicted RBP9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 TTC17Q96AE7 1141 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 TMEM159Q96B96 161 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 PPP1R13BQ96KQ4 1090 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 PNPLA8Q9NP80 782 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 FZD3Q9NPG1 666 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 CASS4Q9NQ75 786 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 PRDM8Q9NQV8 689 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 FAM49BQ9NUQ9 324 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 DONSONQ9NYP3 566 aa9.91□□□□□ -0.82
SMARCAL1-213ENST00000496037 EFCAB7A8K855 629 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 AGRPO00253 132 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 TBL1XO60907 577 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 CST3P01034 146 aaPredicted RBP9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 CSF2P04141 144 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 SRPRAP08240 638 aaKnown RBP9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 TNNI1P19237 187 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 BMT2Q1RMZ1 405 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 C4orf46Q504U0 113 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 FAM46CQ5VWP2 391 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 ESRP1Q6NXG1 681 aaKnown RBP9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 SCARA5Q6ZMJ2 495 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 CLEC20AQ6ZU45 233 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 SCD5Q86SK9 330 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 CCDC117Q8IWD4 279 aaPredicted RBP9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 SLC35F3Q8IY50 421 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 ARHGAP18Q8N392 663 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 WFDC5Q8TCV5 224 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 GPBAR1Q8TDU6 330 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 KLK6Q92876 244 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 PTPRN2Q92932 1015 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 FAM131CQ96AQ9 280 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms