RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ATP9BO43861 1147 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 APBB3O95704 486 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 GLDCP23378 1020 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 PRKCHP24723 683 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 SERPINH1P50454 418 aaKnown RBP17.46■□□□□ 0.39
HDAC6-235ENST00000495515 ARF5P84085 180 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 DLG2Q15700 870 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 TAZQ16635 292 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 SLC9A4Q6AI14 798 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 LINGO4Q6UY18 593 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 ATPAF2Q8N5M1 289 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 NSMCE1Q8WV22 266 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 MYO19Q96H55 970 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 CEP44Q9C0F1 390 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 IPO11Q9UI26 975 aaKnown RBP17.46■□□□□ 0.39
HDAC6-235ENST00000495515 PYCARDQ9ULZ3 195 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 PACSIN2Q9UNF0 486 aaPredicted RBP17.46■□□□□ 0.39
HDAC6-235ENST00000495515 EFR3BQ9Y2G0 817 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 FARP1Q9Y4F1 1045 aaPredicted RBP17.46■□□□□ 0.39
HDAC6-235ENST00000495515 DOCK4Q8N1I0 1966 aa17.46■□□□□ 0.39
HDAC6-235ENST00000495515 hCG_1818297A0A087WSY0 165 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 A0A1W2PQF6 199 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 TCRBV21S2A2A0A5A6 115 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 TTC34A8MYJ7 566 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 PRAMEF11O60813 436 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 SRCP12931 536 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 HLA-EP13747 358 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 HOXA6P31267 233 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 PTPN7P35236 360 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 RECQLP46063 649 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-235ENST00000495515 NRLP54845 237 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 CSTF1Q05048 431 aaKnown RBP17.45■□□□□ 0.38
HDAC6-235ENST00000495515 IL10RBQ08334 325 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 INO80DQ53TQ3 878 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-235ENST00000495515 MEI1Q5TIA1 1274 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 KAZNQ674X7 775 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 TMEM92Q6UXU6 159 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 ALG3Q92685 438 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 FAM126AQ9BYI3 521 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-235ENST00000495515 UBA2Q9UBT2 640 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-235ENST00000495515 MFHAS1Q9Y4C4 1052 aa17.45■□□□□ 0.38
HDAC6-235ENST00000495515 DDX3YO15523 660 aaKnown RBP17.44■□□□□ 0.38
HDAC6-235ENST00000495515 MFSD11O43934 449 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 CST8O60676 142 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 RNASEH1O60930 286 aaKnown RBP17.44■□□□□ 0.38
HDAC6-235ENST00000495515 MT-CO1P00395 513 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 TGM2P21980 687 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 NR2C2P49116 596 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 DNA2P51530 1060 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 DYNLT1P63172 113 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 GALNT2Q10471 571 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 CAMK2GQ13555 558 aaPredicted RBP17.44■□□□□ 0.38
HDAC6-235ENST00000495515 RFTN1Q14699 578 aaPredicted RBP17.44■□□□□ 0.38
HDAC6-235ENST00000495515 ANGPT1Q15389 498 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 TMCO4Q5TGY1 634 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 CCDC181Q5TID7 509 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 TIGD7Q6NT04 549 aaPredicted RBP17.44■□□□□ 0.38
HDAC6-235ENST00000495515 PCDH20Q8N6Y1 951 aaKnown RBP17.44■□□□□ 0.38
HDAC6-235ENST00000495515 PLD5Q8N7P1 536 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 ZNF366Q8N895 744 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 OR2T3Q8NH03 318 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 ISG20Q96AZ6 181 aaKnown RBP17.44■□□□□ 0.38
HDAC6-235ENST00000495515 TRIM44Q96DX7 344 aaPredicted RBP17.44■□□□□ 0.38
HDAC6-235ENST00000495515 ZNF599Q96NL3 588 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 HHIPQ96QV1 700 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 OSBPL8Q9BZF1 889 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 C2orf42Q9NWW7 574 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 BCCIPQ9P287 314 aaKnown RBP eCLIP17.44■□□□□ 0.38
HDAC6-235ENST00000495515 JRKLQ9Y4A0 524 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 HEY1Q9Y5J3 304 aa17.44■□□□□ 0.38
HDAC6-235ENST00000495515 CCDC163A0A0D9SF12 145 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 K7ESF4 209 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 TJP3O95049 919 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 PYGMP11217 842 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 KRT10P13645 584 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 GARSP41250 739 aaKnown RBP17.43■□□□□ 0.38
HDAC6-235ENST00000495515 GBE1Q04446 702 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 ELAVL3Q14576 367 aaKnown RBP17.43■□□□□ 0.38
HDAC6-235ENST00000495515 PDK1Q15118 436 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 ZNF528Q3MIS6 628 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 ZNF569Q5MCW4 686 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 SEL1L2Q5TEA6 688 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 ANO7Q6IWH7 933 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 KIAA1211LQ6NV74 962 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 C22orf39Q6P5X5 142 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 BBS12Q6ZW61 710 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 DSG4Q86SJ6 1040 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 PGBD3Q8N328 593 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 BBS5Q8N3I7 341 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 FRS2Q8WU20 508 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 BRD8Q9H0E9 1235 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 IRF2BPLQ9H1B7 796 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 KCNH6Q9H252 994 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 PDFQ9HBH1 243 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 PRSS16Q9NQE7 514 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 HAUS2Q9NVX0 235 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 POLR3BQ9NW08 1133 aaPredicted RBP17.43■□□□□ 0.38
HDAC6-235ENST00000495515 DTLQ9NZJ0 730 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 EBF1Q9UH73 591 aa17.43■□□□□ 0.38
HDAC6-235ENST00000495515 J3KR12 359 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms