RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 TTC17Q96AE7 1141 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 TMA16Q96EY4 203 aaKnown RBP9.16□□□□□ -0.94
GARNL3-219ENST00000495172 SMARCD1Q96GM5 515 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 TRIM8Q9BZR9 551 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 CDH19Q9H159 772 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 PCIF1Q9H4Z3 704 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 GPR27Q9NS67 375 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 RCOR3Q9P2K3 495 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-219ENST00000495172 ORC3Q9UBD5 711 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-219ENST00000495172 APOBEC3BQ9UH17 382 aaKnown RBP9.16□□□□□ -0.94
GARNL3-219ENST00000495172 ZNF510Q9Y2H8 683 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 KIF3AQ9Y496 699 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 MDC1Q14676 2089 aaKnown RBP9.16□□□□□ -0.94
GARNL3-219ENST00000495172 H3BM21 787 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 TPP1O14773 563 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 RFPL1O75677 317 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 XBP1P17861 261 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 MPSTP25325 297 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 ZRSR2Q15696 482 aaKnown RBP9.15□□□□□ -0.94
GARNL3-219ENST00000495172 PIP5KL1Q5T9C9 394 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 TMEM164Q5U3C3 297 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 CEP135Q66GS9 1140 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 CPZQ66K79 652 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 ESRP1Q6NXG1 681 aaKnown RBP9.15□□□□□ -0.94
GARNL3-219ENST00000495172 KLHDC10Q6PID8 442 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 SKAP1Q86WV1 359 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 APCDD1Q8J025 514 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 FBXL16Q8N461 479 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 GLMNQ92990 594 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 IFT43Q96FT9 208 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 CTRCQ99895 268 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 TMUB1Q9BVT8 246 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 DCLK3Q9C098 648 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 SDCBP2Q9H190 292 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 FBXO44Q9H4M3 255 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 INTS13Q9NVM9 706 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 ASF1BQ9NVP2 202 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 OCIAD1Q9NX40 245 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 MARCH2Q9P0N8 246 aa9.15□□□□□ -0.94
GARNL3-219ENST00000495172 LARSQ9P2J5 1176 aaKnown RBP9.15□□□□□ -0.94
GARNL3-219ENST00000495172 IPO11Q9UI26 975 aaKnown RBP9.15□□□□□ -0.94
GARNL3-219ENST00000495172 ANKUB1A6NFN9 424 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 LMO7DNF2Z398 122 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 BNIP3LO60238 219 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 PPP6R2O75170 966 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 TACC1O75410 805 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 FAM13AO94988 1023 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 PAK4O96013 591 aaPredicted RBP9.14□□□□□ -0.95
GARNL3-219ENST00000495172 NUDT1P36639 197 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 COG7P83436 770 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 GTF2BQ00403 316 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 PDE4CQ08493 712 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 WDR72Q3MJ13 1102 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 AMZ1Q400G9 498 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 ZRANB3Q5FWF4 1079 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 PITRM1Q5JRX3 1037 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 PPP1R15BQ5SWA1 713 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 ANKS6Q68DC2 871 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 HORMAD1Q86X24 394 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 PHACTR4Q8IZ21 702 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 IGSF22Q8N9C0 903 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 SNRNP40Q96DI7 357 aaKnown RBP9.14□□□□□ -0.95
GARNL3-219ENST00000495172 TAAR9Q96RI9 348 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 NUDT22Q9BRQ3 303 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 CBWD1Q9BRT8 395 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 TIPINQ9BVW5 301 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 SLC29A3Q9BZD2 475 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 BRMS1Q9HCU9 246 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 LATS2Q9NRM7 1088 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 COMMD8Q9NX08 183 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 PILRAQ9UKJ1 303 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 TPX2Q9ULW0 747 aaKnown RBP9.14□□□□□ -0.95
GARNL3-219ENST00000495172 PHTF1Q9UMS5 762 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 NAALADL1Q9UQQ1 740 aa9.14□□□□□ -0.95
GARNL3-219ENST00000495172 ATP8B3O60423 1300 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 TMEM200CA6NKL6 621 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 H0YCG3 227 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 MSI1O43347 362 aaKnown RBP9.13□□□□□ -0.95
GARNL3-219ENST00000495172 JAK2O60674 1132 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 PCDH8O95206 1070 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 RNASE9P60153 205 aaKnown RBP9.13□□□□□ -0.95
GARNL3-219ENST00000495172 CDK18Q07002 472 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 ELAVL3Q14576 367 aaKnown RBP9.13□□□□□ -0.95
GARNL3-219ENST00000495172 MAP9Q49MG5 647 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 KCTD16Q68DU8 428 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 SLFN12LQ6IEE8 588 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 JMJD6Q6NYC1 403 aaPredicted RBP9.13□□□□□ -0.95
GARNL3-219ENST00000495172 CPLX2Q6PUV4 134 aaKnown RBP9.13□□□□□ -0.95
GARNL3-219ENST00000495172 TAOK1Q7L7X3 1001 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 GPBP1Q86WP2 473 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 MFN1Q8IWA4 741 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 CFAP52Q8N1V2 620 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 CARNMT1Q8N4J0 409 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 CISD2Q8N5K1 135 aaKnown RBP9.13□□□□□ -0.95
GARNL3-219ENST00000495172 ARL10Q8N8L6 244 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 KCNB2Q92953 911 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 ZNF274Q96GC6 653 aaPredicted RBP9.13□□□□□ -0.95
GARNL3-219ENST00000495172 ANKRD36BP1Q96IX9 119 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 CCDC74BQ96LY2 380 aa9.13□□□□□ -0.95
GARNL3-219ENST00000495172 PRICKLE1Q96MT3 831 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms