RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ARL4AP40617 200 aa16.28■□□□□ 0.2
LIME1-209ENST00000494776 DPP6P42658 865 aa16.28■□□□□ 0.2
LIME1-209ENST00000494776 SERPINH1P50454 418 aaKnown RBP16.28■□□□□ 0.2
LIME1-209ENST00000494776 ZNF135P52742 658 aaPredicted RBP16.28■□□□□ 0.2
LIME1-209ENST00000494776 YBEYP58557 167 aaPredicted RBP16.28■□□□□ 0.2
LIME1-209ENST00000494776 RFX8Q6ZV50 586 aa16.28■□□□□ 0.2
LIME1-209ENST00000494776 RGL4Q8IZJ4 473 aa16.28■□□□□ 0.2
LIME1-209ENST00000494776 FOXJ1Q92949 421 aa16.28■□□□□ 0.2
LIME1-209ENST00000494776 VPS45Q9NRW7 570 aa16.28■□□□□ 0.2
LIME1-209ENST00000494776 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.28■□□□□ 0.2
LIME1-209ENST00000494776 DOCK4Q8N1I0 1966 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 A0A1W2PP55 124 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 RASA4BC9J798 803 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 C1QTNF3-AMACRE9PGA6 284 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 RASA4O43374 803 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 SMAD6O43541 496 aaKnown RBP16.27■□□□□ 0.2
LIME1-209ENST00000494776 BUB1O43683 1085 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 KDELR3O43731 214 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 FOXD2O60548 495 aaPredicted RBP16.27■□□□□ 0.2
LIME1-209ENST00000494776 RNASEH2AO75792 299 aaKnown RBP16.27■□□□□ 0.2
LIME1-209ENST00000494776 ZMPSTE24O75844 475 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 IGLV3-19P01714 112 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 ZNF806P0C7X5 589 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 RARAP10276 462 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 TCF4P15884 667 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 C5AR1P21730 350 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 ITPKAP23677 461 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 CYLC1P35663 651 aaPredicted RBP16.27■□□□□ 0.2
LIME1-209ENST00000494776 GJC1P36383 396 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 ARF5P84085 180 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 LMNB2Q03252 620 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 KRT81Q14533 505 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 SPA17Q15506 151 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 PARP15Q460N3 678 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 AASDHQ4L235 1098 aaPredicted RBP16.27■□□□□ 0.2
LIME1-209ENST00000494776 ZFYVE27Q5T4F4 411 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 FAM46CQ5VWP2 391 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 C22orf39Q6P5X5 142 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 PRR23CQ6ZRP0 262 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 CYP4V2Q6ZWL3 525 aaPredicted RBP16.27■□□□□ 0.2
LIME1-209ENST00000494776 USP30Q70CQ3 517 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 SYT12Q8IV01 421 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 HDDC3Q8N4P3 179 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 SLC35G2Q8TBE7 412 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 TEKT4Q8WW24 435 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 HMCESQ96FZ2 354 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 PANX2Q96RD6 677 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 TNKS2Q9H2K2 1166 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 SMOC1Q9H4F8 434 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 SGK2Q9HBY8 427 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 OSGEPQ9NPF4 335 aa16.27■□□□□ 0.2
LIME1-209ENST00000494776 THADAQ6YHU6 1953 aa16.27■□□□□ 0.19
LIME1-209ENST00000494776 ATXN2Q99700 1313 aaKnown RBP16.26■□□□□ 0.19
LIME1-209ENST00000494776 ZSCAN5CA6NGD5 496 aaPredicted RBP16.26■□□□□ 0.19
LIME1-209ENST00000494776 MCF2LO15068 1137 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 ALOX15BO15296 676 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 PROSCO94903 275 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 SEMA4FO95754 770 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 ERCC2P18074 760 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 TGM1P22735 817 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 ACSL1P33121 698 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 MAGEA1P43355 309 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 ID4P47928 161 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 HCAR3P49019 387 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 FOXK2Q01167 660 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 MESDQ14696 234 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 SF3A2Q15428 464 aaKnown RBP16.26■□□□□ 0.19
LIME1-209ENST00000494776 DPYSL2Q16555 572 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 WDR45BQ5MNZ6 344 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 PLA2G2CQ5R387 149 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 LEKR1Q6ZMV7 388 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 SLC41A1Q8IVJ1 513 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 RHOT2Q8IXI1 618 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 CCDC170Q8IYT3 715 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 UMODL1-AS1Q8N2C9 162 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 RYBPQ8N488 228 aaPredicted RBP16.26■□□□□ 0.19
LIME1-209ENST00000494776 PCDH20Q8N6Y1 951 aaKnown RBP16.26■□□□□ 0.19
LIME1-209ENST00000494776 CADM4Q8NFZ8 388 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 SNX19Q92543 992 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 ZNF419Q96HQ0 510 aaPredicted RBP16.26■□□□□ 0.19
LIME1-209ENST00000494776 CELF6Q96J87 481 aaKnown RBP16.26■□□□□ 0.19
LIME1-209ENST00000494776 CEP44Q9C0F1 390 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 NEUROG2Q9H2A3 272 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 LUC7LQ9NQ29 371 aaKnown RBP16.26■□□□□ 0.19
LIME1-209ENST00000494776 CWC15Q9P013 229 aaKnown RBP16.26■□□□□ 0.19
LIME1-209ENST00000494776 INTUQ9ULD6 942 aa16.26■□□□□ 0.19
LIME1-209ENST00000494776 FCF1Q9Y324 198 aaKnown RBP16.26■□□□□ 0.19
LIME1-209ENST00000494776 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.26■□□□□ 0.19
LIME1-209ENST00000494776 ABCA7Q8IZY2 2146 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 SPAG17Q6Q759 2223 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 CXorf51AA0A1B0GTR3 108 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 FAM47DPA6NHR8 397 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 ARHGAP42A6NI28 874 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 GOLGA6L6A8MZA4 724 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 KHNYNO15037 678 aaKnown RBP16.25■□□□□ 0.19
LIME1-209ENST00000494776 IPO7O95373 1038 aaKnown RBP16.25■□□□□ 0.19
LIME1-209ENST00000494776 C7P10643 843 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 CHRNA3P32297 505 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 NDST2P52849 883 aa16.25■□□□□ 0.19
LIME1-209ENST00000494776 CDH6P55285 790 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms