RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 NTAN1Q96AB6 310 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 FAM131CQ96AQ9 280 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 CCDC42Q96M95 316 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 FAM129BQ96TA1 746 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 TSGA10Q9BZW7 698 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 ZYG11BQ9C0D3 744 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 RETREG1Q9H6L5 497 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 OSGEPQ9NPF4 335 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 FSCN3Q9NQT6 498 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 FBXL12Q9NXK8 326 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 MPP6Q9NZW5 540 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 SERGEFQ9UGK8 458 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 DNAI1Q9UI46 699 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 NCOR2Q9Y618 2525 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 ILVBLA1L0T0 632 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 UPK3BL1B0FP48 263 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 C10orf142B7Z368 130 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 UPK3BL2E5RIL1 263 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 BCAT2O15382 392 aaPredicted RBP13.51□□□□□ -0.25
ERCC3-209ENST00000494464 GJB6O95452 261 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 SRCP12931 536 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 VAV1P15498 845 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 SLC8A1P32418 973 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 ADRA1BP35368 520 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 PRKCIP41743 596 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 PSMD8P48556 350 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 NUMBP49757 651 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 CLCN6P51797 869 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 GNG11P61952 73 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 SCAPQ12770 1279 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 GRIK2Q13002 908 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 ASTE1Q2TB18 679 aaPredicted RBP13.51□□□□□ -0.25
ERCC3-209ENST00000494464 RAB6CQ53S08 254 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 PPP1R15BQ5SWA1 713 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 SH3PXD2AQ5TCZ1 1133 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 HGSNATQ68CP4 663 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 ACAD10Q6JQN1 1059 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 TFAP2DQ7Z6R9 452 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 DSG4Q86SJ6 1040 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 PHLDB2Q86SQ0 1253 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 TXLNBQ8N3L3 684 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 MINDY1Q8N5J2 469 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 FAM172AQ8WUF8 416 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 OR8D1Q8WZ84 308 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 VCPIP1Q96JH7 1222 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 RAB6CQ9H0N0 254 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 OSBPL2Q9H1P3 480 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 DNAAF2Q9NVR5 837 aaKnown RBP13.51□□□□□ -0.25
ERCC3-209ENST00000494464 EIF2B4Q9UI10 523 aaKnown RBP13.51□□□□□ -0.25
ERCC3-209ENST00000494464 VPS51Q9UID3 782 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 PLXNA2O75051 1894 aa13.51□□□□□ -0.25
ERCC3-209ENST00000494464 TP53BP1Q12888 1972 aaPredicted RBP13.5□□□□□ -0.25
ERCC3-209ENST00000494464 ASCC3Q8N3C0 2202 aaKnown RBP13.5□□□□□ -0.25
ERCC3-209ENST00000494464 CXorf51AA0A1B0GTR3 108 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 A0A1W2PP55 124 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 ANKRD62A6NC57 917 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 DYNC1I1O14576 645 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 CTIFO43310 598 aaKnown RBP13.5□□□□□ -0.25
ERCC3-209ENST00000494464 SRGAP2O75044 1071 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 GJB3O75712 270 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 OR1E1P30953 314 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 EIF4A3P38919 411 aaKnown RBP13.5□□□□□ -0.25
ERCC3-209ENST00000494464 NOVA1P51513 510 aaKnown RBP13.5□□□□□ -0.25
ERCC3-209ENST00000494464 VAV2P52735 878 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 ZNF143P52747 638 aaPredicted RBP13.5□□□□□ -0.25
ERCC3-209ENST00000494464 SEMA3BQ13214 749 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 SPA17Q15506 151 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 ASIC2Q16515 512 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 UAP1L1Q3KQV9 507 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 KIAA0895LQ68EN5 471 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 PSAPL1Q6NUJ1 521 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 Q6ZVU0 165 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 MCOLN2Q8IZK6 566 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 HDDC3Q8N4P3 179 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 AADATQ8N5Z0 425 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 SNX19Q92543 992 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 BIRC7Q96CA5 298 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 MCEEQ96PE7 176 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 OMDQ99983 421 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 GTPBP2Q9BX10 602 aaKnown RBP13.5□□□□□ -0.25
ERCC3-209ENST00000494464 MIR1-1HGQ9H1L0 117 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 LZTFL1Q9NQ48 299 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 OR12D3Q9UGF7 316 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 TPX2Q9ULW0 747 aaKnown RBP13.5□□□□□ -0.25
ERCC3-209ENST00000494464 NEU3Q9UQ49 428 aa13.5□□□□□ -0.25
ERCC3-209ENST00000494464 BZW2Q9Y6E2 419 aaKnown RBP13.5□□□□□ -0.25
ERCC3-209ENST00000494464 A0A0D9SEW6 157 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 LRRC72A6NJI9 287 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 C1QTNF3-AMACRE9PGA6 284 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 MCF2LO15068 1137 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 FANCGO15287 622 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 SNAP91O60641 907 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 OPHN1O60890 802 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 RNASEH2AO75792 299 aaKnown RBP13.49□□□□□ -0.25
ERCC3-209ENST00000494464 IL1BP01584 269 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 IGHV4-34P06331 123 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 CEACAM1P13688 526 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 RHOQP17081 205 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 GOT1P17174 413 aa13.49□□□□□ -0.25
ERCC3-209ENST00000494464 TNFAIP3P21580 790 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms