RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 ZNF623O75123 536 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 FAM107AO95990 144 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 IFNB1P01574 187 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 RBP3P10745 1247 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 RARBP10826 455 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 SDC4P31431 198 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 STIP1P31948 543 aaKnown RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 ACADSBP45954 432 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 NDUFV1P49821 464 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 CLCNKBP51801 687 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 BCAT1P54687 386 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 SNX16P57768 344 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 ADCY1Q08828 1119 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 SLC10A2Q12908 348 aaPredicted RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 IKZF1Q13422 519 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 FASTKD3Q14CZ7 662 aaKnown RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 KCNA10Q16322 511 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 TRIM71Q2Q1W2 868 aaKnown RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 CCDC38Q502W7 563 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 FAM47CQ5HY64 1035 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 SLC9A4Q6AI14 798 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 DARS2Q6PI48 645 aaKnown RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 C6orf89Q6UWU4 347 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 CEP128Q6ZU80 1094 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 BNIPLQ7Z465 357 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 PIGZQ86VD9 579 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 VSIG1Q86XK7 387 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 TDRPQ86YL5 185 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 IGDCC3Q8IVU1 814 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 PPIL6Q8IXY8 311 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 ADGRF2Q8IZF7 708 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 ABI1Q8IZP0 508 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 C19orf47Q8N9M1 422 aaKnown RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 FAM71DQ8N9W8 422 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 B3GALNT2Q8NCR0 500 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 SPATA18Q8TC71 538 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 RSAD2Q8WXG1 361 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 KCTD13Q8WZ19 329 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 LPPQ93052 612 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 NT5C3BQ969T7 300 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 FAF2Q96CS3 445 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 TNIP3Q96KP6 325 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 ZNF317Q96PQ6 595 aaPredicted RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 GAD1Q99259 594 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 TBCBQ99426 244 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 NCAPGQ9BPX3 1015 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 WDR83Q9BRX9 315 aaKnown RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 SNRNP25Q9BV90 132 aaKnown RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 CALN1Q9BXU9 219 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 TRIT1Q9H3H1 467 aaKnown RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 CCDC134Q9H6E4 229 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 NGRNQ9NPE2 291 aaKnown RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 UBN1Q9NPG3 1134 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 CRTAC1Q9NQ79 661 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 LMCD1Q9NZU5 365 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 SUCOQ9UBS9 1254 aaKnown RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 CTNNAL1Q9UBT7 734 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 SRRDQ9UH36 339 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 SFMBT1Q9UHJ3 866 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 GGA2Q9UJY4 613 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 TSC2P49815 1807 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 A0A087WUV0 522 aaPredicted RBP6.2□□□□□ -1.42
CPSF7-213ENST00000494016 MYBPHLA2RUH7 354 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 FAM86C2PA6NEL3 165 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 ARL5CA6NH57 179 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 ZNF487B1APH4 448 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 GOLGA8MH3BSY2 632 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 H7C0C1 242 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 EBAG9O00559 213 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 NDUFAB1O14561 156 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 NDC80O14777 642 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 BANF1O75531 89 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 FYNP06241 537 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 THP07101 528 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 ASGR1P07306 291 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 CD53P19397 219 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 TGM2P21980 687 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 ACAT1P24752 427 aaKnown RBP6.2□□□□□ -1.42
CPSF7-213ENST00000494016 RBL1P28749 1068 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 CCND3P30281 292 aaPredicted RBP6.2□□□□□ -1.42
CPSF7-213ENST00000494016 RPL9P32969 192 aaKnown RBP6.2□□□□□ -1.42
CPSF7-213ENST00000494016 ATP5OP48047 213 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 RABGGTBP53611 331 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 PITX1P78337 314 aaPredicted RBP6.2□□□□□ -1.42
CPSF7-213ENST00000494016 MRPS5P82675 430 aaKnown RBP6.2□□□□□ -1.42
CPSF7-213ENST00000494016 ROR1Q01973 937 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 PDIA2Q13087 525 aaKnown RBP6.2□□□□□ -1.42
CPSF7-213ENST00000494016 SERINC3Q13530 473 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 KRT81Q14533 505 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 KCNJ11Q14654 390 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 DPYSL2Q16555 572 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 GAB4Q2WGN9 574 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 EFHC1Q5JVL4 640 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 OTUD1Q5VV17 481 aaPredicted RBP6.2□□□□□ -1.42
CPSF7-213ENST00000494016 CLEC20AQ6ZU45 233 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 CENPUQ71F23 418 aa6.2□□□□□ -1.42
CPSF7-213ENST00000494016 TMPRSS7Q7RTY8 843 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms