RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 SCOCQ9UIL1 159 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 CHKBQ9Y259 395 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 MTO1Q9Y2Z2 717 aaKnown RBP10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 ASB3Q9Y575 518 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 TCRBV7S2A1N4TA0A589 114 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 PDLIM1O00151 329 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 DPYSL4O14531 572 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 TNFRSF10BO14763 440 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 ATXN7O15265 892 aaPredicted RBP10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 NVLO15381 856 aaKnown RBP10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 CYP26A1O43174 497 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 SNUPNO95149 360 aaKnown RBP10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 ITGAVP06756 1048 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 PECAM1P16284 738 aaPredicted RBP10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 KRT15P19012 456 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 BCKDHBP21953 392 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 TBXAS1P24557 533 aaPredicted RBP10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 FOXN2P32314 431 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 HOXD12P35452 270 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 PCK1P35558 622 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 DPP6P42658 865 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 MAPK8P45983 427 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 KCNJ1P48048 391 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 GCLMP48507 274 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 DGKEP52429 567 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 WDR4P57081 412 aaKnown RBP10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 CLDN10P78369 228 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 SOX4Q06945 474 aaPredicted RBP10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 MPP2Q14168 576 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 TMED2Q15363 201 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 SNRNP35Q16560 246 aaKnown RBP10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 MUM1Q2TAK8 710 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 STXBP5Q5T5C0 1151 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 AADACL2Q6P093 401 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 GAREM2Q75VX8 874 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 ZNF605Q86T29 641 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 DNAAF5Q86Y56 855 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 SYT12Q8IV01 421 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 ATP11CQ8NB49 1132 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 GDAP1Q8TB36 358 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 PARD3BQ8TEW8 1205 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 BSNDQ8WZ55 320 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 PIGKQ92643 395 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 UTP4Q969X6 686 aaKnown RBP10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 ACDQ96AP0 544 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 SLC7A6OSQ96CW6 309 aaPredicted RBP10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 NTPCRQ9BSD7 190 aaKnown RBP10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 TRIM55Q9BYV6 548 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 HPS4Q9NQG7 708 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 PRMT7Q9NVM4 692 aaPredicted RBP10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 ZFP69BQ9UJL9 534 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 KNTC1P50748 2209 aa10.89□□□□□ -0.67
PDLIM1-205ENST00000493949 HELZP42694 1942 aaKnown RBP10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 LRRIQ4A6NIV6 560 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 LIASO43766 372 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 PRAMEF12O95522 483 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 LSM8O95777 96 aaKnown RBP10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 CA4P22748 312 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 RRM1P23921 792 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 ADSSP30520 456 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 DHPSP49366 369 aaPredicted RBP10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 RARRES1P49788 294 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 CCNHP51946 323 aaPredicted RBP10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 GEMIN4P57678 1058 aaKnown RBP10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 RUNX3Q13761 415 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 SEPT7Q16181 437 aaKnown RBP10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 PLEKHA7Q6IQ23 1121 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 ADGRD1Q6QNK2 874 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 C4orf50Q6ZRC1 276 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 MON1BQ7L1V2 547 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 NLRP9Q7RTR0 991 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 POLNQ7Z5Q5 900 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 SLC47A2Q86VL8 602 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 GALNT15Q8N3T1 639 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 HDDC3Q8N4P3 179 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 ALLCQ8N6M5 410 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 NIPA2Q8N8Q9 360 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 RPLP0P6Q8NHW5 317 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 UHMK1Q8TAS1 419 aaKnown RBP10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 PIP4K2CQ8TBX8 421 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 C1orf54Q8WWF1 131 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 PRCCQ92733 491 aaPredicted RBP10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 BTBD10Q9BSF8 475 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 DHRS4Q9BTZ2 278 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 FZD8Q9H461 694 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 SYNCQ9H7C4 482 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 FBRSL1Q9HCM7 1045 aaKnown RBP10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 TMEM74BQ9NUR3 256 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 PARVAQ9NVD7 372 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 THG1LQ9NWX6 298 aaKnown RBP10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 MKS1Q9NXB0 559 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 STX18Q9P2W9 335 aaKnown RBP10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 MBD1Q9UIS9 605 aaPredicted RBP10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 TBX20Q9UMR3 447 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 CNTN6Q9UQ52 1028 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 YIPF1Q9Y548 306 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 MYO18AQ92614 2054 aaKnown RBP10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 TEX15Q9BXT5 2789 aa10.88□□□□□ -0.67
PDLIM1-205ENST00000493949 MAGEA13PA6NCF6 341 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms