RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 OR12D3Q9UGF7 316 aa12.92□□□□□ -0.34
HSPG2-212ENST00000493940 IGF2RP11717 2491 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 TMCO5BA8MYB1 307 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 UPK3BL1B0FP48 263 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 UPK3BL2E5RIL1 263 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 MCF2LO15068 1137 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 OPHN1O60890 802 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 LRIG2O94898 1065 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 SYPP08247 313 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 GNSP15586 552 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 FERP16591 822 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 GPD1P21695 349 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 C5AR1P21730 350 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 CD27P26842 260 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 SDC4P31431 198 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 PBX1P40424 430 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 NSFP46459 744 aaKnown RBP12.91□□□□□ -0.34
HSPG2-212ENST00000493940 ZNF252P-AS1Q0IIN9 211 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 CNTN1Q12860 1018 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 TTC31Q49AM3 519 aaPredicted RBP12.91□□□□□ -0.34
HSPG2-212ENST00000493940 AGBL4Q5VU57 503 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 LEKR1Q6ZMV7 388 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 STRADAQ7RTN6 431 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 RABEPKQ7Z6M1 372 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 SETD3Q86TU7 594 aaPredicted RBP12.91□□□□□ -0.34
HSPG2-212ENST00000493940 MSANTD4Q8NCY6 345 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 OR14C36Q8NHC7 312 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 ARRDC3Q96B67 414 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 SLC6A18Q96N87 628 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 MCEEQ96PE7 176 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 OMDQ99983 421 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 SPON2Q9BUD6 331 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 SELENOOQ9BVL4 669 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 ACE2Q9BYF1 805 aaPredicted RBP12.91□□□□□ -0.34
HSPG2-212ENST00000493940 ZYG11BQ9C0D3 744 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 OSBPL2Q9H1P3 480 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 HAUS4Q9H6D7 363 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 PPARGC1AQ9UBK2 798 aaKnown RBP12.91□□□□□ -0.34
HSPG2-212ENST00000493940 SUSD2Q9UGT4 822 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 DNAI1Q9UI46 699 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 SLC25A13Q9UJS0 675 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 NCKAP1Q9Y2A7 1128 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 BTBD3Q9Y2F9 522 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 ANKRD6Q9Y2G4 727 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 DMXL2Q8TDJ6 3036 aa12.91□□□□□ -0.34
HSPG2-212ENST00000493940 A0A1W2PPC4 97 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 A0A1W2PR77 199 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 ILVBLA1L0T0 632 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 SMTNL1A8MU46 457 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 DDX3XO00571 662 aaKnown RBP eCLIP12.9□□□□□ -0.34
HSPG2-212ENST00000493940 RNASEH1O60930 286 aaKnown RBP12.9□□□□□ -0.34
HSPG2-212ENST00000493940 CBFA2T3O75081 653 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 ADH1BP00325 375 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 PLEKP08567 350 aaPredicted RBP12.9□□□□□ -0.34
HSPG2-212ENST00000493940 TNFAIP3P21580 790 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 ATXN3P54252 364 aaPredicted RBP12.9□□□□□ -0.34
HSPG2-212ENST00000493940 OXCT1P55809 520 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 NRG1Q02297 640 aaPredicted RBP12.9□□□□□ -0.34
HSPG2-212ENST00000493940 GNA12Q03113 381 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 C1QBPQ07021 282 aaKnown RBP12.9□□□□□ -0.34
HSPG2-212ENST00000493940 MTA1Q13330 715 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 ELAVL3Q14576 367 aaKnown RBP12.9□□□□□ -0.34
HSPG2-212ENST00000493940 KLHL40Q2TBA0 621 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 LRRC31Q6UY01 552 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 DBX2Q6ZNG2 339 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 DCAF4L2Q8NA75 395 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 KDF1Q8NAX2 398 aaPredicted RBP12.9□□□□□ -0.34
HSPG2-212ENST00000493940 ATP11CQ8NB49 1132 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 OR2T34Q8NGX1 318 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 NAT10Q9H0A0 1025 aaKnown RBP12.9□□□□□ -0.34
HSPG2-212ENST00000493940 GPATCH2LQ9NWQ4 482 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 AIPL1Q9NZN9 384 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 RALYQ9UKM9 306 aaKnown RBP12.9□□□□□ -0.34
HSPG2-212ENST00000493940 FZD4Q9ULV1 537 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 SCML1Q9UN30 329 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 CA5BQ9Y2D0 317 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 KNTC1P50748 2209 aa12.9□□□□□ -0.34
HSPG2-212ENST00000493940 A0A1W2PQC6 194 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 H0Y8X5 98 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 CBX4O00257 560 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 CALB1P05937 261 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 MAT2AP31153 395 aaKnown RBP12.89□□□□□ -0.35
HSPG2-212ENST00000493940 GKP32189 559 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 CHRNA3P32297 505 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 NNMTP40261 264 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 ZNF143P52747 638 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-212ENST00000493940 FANCCQ00597 558 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 FOXC1Q12948 553 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 MAMLD1Q13495 774 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 SHBQ15464 509 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 CA9Q16790 459 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 ARSIQ5FYB1 569 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 PIP5KL1Q5T9C9 394 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 UNQ6494/PRO21346Q6UXR6 183 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 DPY19L3Q6ZPD9 716 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 CYP4V2Q6ZWL3 525 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-212ENST00000493940 OR8D1Q8WZ84 308 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 KLK6Q92876 244 aa12.89□□□□□ -0.35
HSPG2-212ENST00000493940 ARHGEF2Q92974 986 aaKnown RBP12.89□□□□□ -0.35
HSPG2-212ENST00000493940 PEBP4Q96S96 227 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms