RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 METTL5Q9NRN9 209 aaKnown RBP11.84□□□□□ -0.51
BRCA1-222ENST00000493919 PCDHB8Q9UN66 801 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 IRAK3Q9Y616 596 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 A0A0C4DFX4 3053 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 BRWD1Q9NSI6 2320 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 WDR91A4D1P6 747 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 AGPSO00116 658 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 CYB561D2O14569 222 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 RGS13O14921 159 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 PEX1O43933 1283 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 ADH1AP07327 375 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 NQO1P15559 274 aaKnown RBP11.83□□□□□ -0.52
BRCA1-222ENST00000493919 RGS7P49802 495 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 NDUFV1P49821 464 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 ARPP19P56211 112 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 GUCY2DQ02846 1103 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 YWHAHQ04917 246 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-222ENST00000493919 DUSP6Q16828 381 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 GLE1Q53GS7 698 aaKnown RBP11.83□□□□□ -0.52
BRCA1-222ENST00000493919 HSP90AA4PQ58FG1 418 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 C1orf220Q5T0J3 134 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 CCNJQ5T5M9 372 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 PPP1R2P3Q6NXS1 205 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 KLHL35Q6PF15 583 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 C11orf57Q6ZUT1 292 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-222ENST00000493919 ANKS3Q6ZW76 656 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 IFT20Q8IY31 132 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 CPSF7Q8N684 471 aaKnown RBP11.83□□□□□ -0.52
BRCA1-222ENST00000493919 ARFGAP2Q8N6H7 521 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 CCNYL1Q8N7R7 359 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 ATP6V0D2Q8N8Y2 350 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 LNX1Q8TBB1 728 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-222ENST00000493919 CIDECQ96AQ7 238 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-222ENST00000493919 ELMO3Q96BJ8 720 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 HS6ST2Q96MM7 605 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 KLHL5Q96PQ7 755 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 TRIM15Q9C019 465 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 SP140LQ9H930 580 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.83□□□□□ -0.52
BRCA1-222ENST00000493919 CLEC4AQ9UMR7 237 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 ERVK-11Q9UQG0 969 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 PLAAQ9Y263 795 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 HCFC2Q9Y5Z7 792 aa11.83□□□□□ -0.52
BRCA1-222ENST00000493919 MAGEB16A2A368 324 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 A8MVJ9 347 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 STMND1H3BQB6 276 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 M0QZQ0 153 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 SNPHO15079 494 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 TJP3O95049 919 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 AGR2O95994 175 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 CST3P01034 146 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-222ENST00000493919 RXRGP48443 463 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 HNRNPFP52597 415 aaKnown RBP11.82□□□□□ -0.52
BRCA1-222ENST00000493919 GPR85P60893 370 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 CLDN10P78369 228 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 CREMQ03060 361 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 PPP3CAQ08209 521 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 CDC20Q12834 499 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 CSTF3Q12996 717 aaKnown RBP11.82□□□□□ -0.52
BRCA1-222ENST00000493919 NCOA4Q13772 614 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 ARID5BQ14865 1188 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 WSCD2Q2TBF2 565 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 ZNF699Q32M78 642 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 ANO6Q4KMQ2 910 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 CTXN3Q4LDR2 81 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 FOXR2Q6PJQ5 311 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 SV2AQ7L0J3 742 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 CEP70Q8NHQ1 597 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 ATP6V1G3Q96LB4 118 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 CNOT6LQ96LI5 555 aaKnown RBP11.82□□□□□ -0.52
BRCA1-222ENST00000493919 MED15Q96RN5 788 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 MMS19Q96T76 1030 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 MRM3Q9HC36 420 aaKnown RBP11.82□□□□□ -0.52
BRCA1-222ENST00000493919 PRDM6Q9NQX0 595 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.82□□□□□ -0.527e-7■□□□□ 9.9
BRCA1-222ENST00000493919 ZNF624Q9P2J8 865 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-222ENST00000493919 CDY1Q9Y6F8 540 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 PLXNA3P51805 1871 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 ARHGEF37A1IGU5 675 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 IKBKBO14920 756 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 XPO1O14980 1071 aaKnown RBP11.82□□□□□ -0.52
BRCA1-222ENST00000493919 HUS1O60921 280 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 C4BPAP04003 597 aaKnown RBP11.82□□□□□ -0.52
BRCA1-222ENST00000493919 GSTM1P09488 218 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 CPB1P15086 417 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 EPCAMP16422 314 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 KCNA5P22460 613 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 ACAT1P24752 427 aaKnown RBP11.82□□□□□ -0.52
BRCA1-222ENST00000493919 ABCG1P45844 678 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 SEPHS1P49903 392 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 ZNF165P49910 485 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 RPS3AP61247 264 aaKnown RBP11.82□□□□□ -0.52
BRCA1-222ENST00000493919 C19orf57Q0VDD7 668 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 ZACNQ401N2 412 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 OVOS1Q6IE37 1185 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 ERAP2Q6P179 960 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 SCARA5Q6ZMJ2 495 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 KCTD20Q7Z5Y7 419 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 STX12Q86Y82 276 aa11.82□□□□□ -0.52
BRCA1-222ENST00000493919 TMTC1Q8IUR5 882 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms