RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 SCAPQ12770 1279 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 CAMK2GQ13555 558 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 PIGHQ14442 188 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 ARID5BQ14865 1188 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 HNRNPA1L2Q32P51 320 aaKnown RBP10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 PPP6R3Q5H9R7 873 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 ERMARDQ5T6L9 678 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 PMS2CLQ68D20 193 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 ZNF776Q68DI1 518 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 LINGO4Q6UY18 593 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 LPCAT2Q7L5N7 544 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 TMEFF1Q8IYR6 380 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 ATP11CQ8NB49 1132 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 ZNF564Q8TBZ8 553 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 FNIP1Q8TF40 1166 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 MRGPRX3Q96LB0 322 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 PEBP4Q96S96 227 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 SNRNP25Q9BV90 132 aaKnown RBP10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 CD248Q9HCU0 757 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 CD93Q9NPY3 652 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 PRSS16Q9NQE7 514 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 IP6K2Q9UHH9 426 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 VPS51Q9UID3 782 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 OR51B4Q9Y5P0 310 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 CELSR3Q9NYQ7 3312 aa10.66□□□□□ -0.7
TRAPPC12-222ENST00000493792 ASXL3Q9C0F0 2248 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 MUC22E2RYF6 1773 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 IGHV1OR15-9A0A0B4J2B8 117 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 RAMP2O60895 175 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 LRCH4O75427 683 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 VAV1P15498 845 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 GLDCP23378 1020 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 ETFBP38117 255 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 MAPKAPK2P49137 400 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 DNA2P51530 1060 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 COPAP53621 1224 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 POLD3Q15054 466 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 DLG2Q15700 870 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 CA9Q16790 459 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 SMTNL2Q2TAL5 461 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 MAP7D1Q3KQU3 841 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 ZFYVE27Q5T4F4 411 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 MANEALQ5VSG8 457 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 SLC36A4Q6YBV0 504 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 CYP2U1Q7Z449 544 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 PIP4P1Q86T03 277 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 MMAAQ8IVH4 418 aaKnown RBP10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 STK40Q8N2I9 435 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 ARFGAP1Q8N6T3 406 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 TC2NQ8N9U0 490 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 DCAF4L2Q8NA75 395 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 KDM1BQ8NB78 822 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 SPC24Q8NBT2 197 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 HSPH1Q92598 858 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 ALG14Q96F25 216 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 MYO19Q96H55 970 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 PSMB7Q99436 277 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 CATSPERBQ9H7T0 1116 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 FBRSQ9HAH7 460 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 TMEM248Q9NWD8 314 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 HPCAL4Q9UM19 191 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 FARP1Q9Y4F1 1045 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 GPSM3Q9Y4H4 160 aa10.65□□□□□ -0.7
TRAPPC12-222ENST00000493792 ASCC3Q8N3C0 2202 aaKnown RBP10.65□□□□□ -0.71
TRAPPC12-222ENST00000493792 SETXQ7Z333 2677 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 TARSL2A2RTX5 802 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 GOLGA6L6A8MZA4 724 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 K7ERQ8 282 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 FGF10O15520 208 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 MT-CO1P00395 513 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 IL1BP01584 269 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 TMEM253P0C7T8 217 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 CD6P30203 668 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 PCK1P35558 622 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 ACVRL1P37023 503 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 ARL4AP40617 200 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 RECQLP46063 649 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 PSMD8P48556 350 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 RPS14P62263 151 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 MESDQ14696 234 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 HADHQ16836 314 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 ASTE1Q2TB18 679 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 UAP1L1Q3KQV9 507 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 TTC31Q49AM3 519 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 KCNT1Q5JUK3 1230 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 C9orf64Q5T6V5 341 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 RETSATQ6NUM9 610 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 ZNF783Q6ZMS7 281 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 LEKR1Q6ZMV7 388 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 Q6ZVU0 165 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 PROSER1Q86XN7 944 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 SH2D3CQ8N5H7 860 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 RTL3Q8N8U3 475 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 PIGKQ92643 395 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 TOE1Q96GM8 510 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 KCTD15Q96SI1 283 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 MAGEH1Q9H213 219 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 ITM2CQ9NQX7 267 aa10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.64□□□□□ -0.71
TRAPPC12-222ENST00000493792 NDFIP2Q9NV92 336 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms