RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 IRF7Q92985 503 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 FMO2Q99518 471 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 CEP41Q9BYV8 373 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 GBA3Q9H227 469 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 EIF2B3Q9NR50 452 aaKnown RBP12.92□□□□□ -0.34
VPS52-220ENST00000493674 SPHK2Q9NRA0 654 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 ANAPC5Q9UJX4 755 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 ATP8A1Q9Y2Q0 1164 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 TCRBV7S3A2A0A539 114 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 ZBTB24O43167 697 aaPredicted RBP12.91□□□□□ -0.34
VPS52-220ENST00000493674 PPFIA2O75334 1257 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 CYP17A1P05093 508 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 VIPR2P41587 438 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 PLK1P53350 603 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 FCHO2Q0JRZ9 810 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 SKIV2LQ15477 1246 aaKnown RBP12.91□□□□□ -0.34
VPS52-220ENST00000493674 CCDC85BQ15834 202 aaPredicted RBP12.91□□□□□ -0.34
VPS52-220ENST00000493674 PARP6Q2NL67 630 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 FAM182AQ5T1J6 154 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 ALG1LQ6GMV1 187 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 TMC3Q7Z5M5 1100 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 KIAA0907Q7Z7F0 614 aaPredicted RBP12.91□□□□□ -0.34
VPS52-220ENST00000493674 TMEM25Q86YD3 366 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 RELL1Q8IUW5 271 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.91□□□□□ -0.34
VPS52-220ENST00000493674 ADGRG2Q8IZP9 1017 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 CARNMT1Q8N4J0 409 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.91□□□□□ -0.34
VPS52-220ENST00000493674 DCAF4L2Q8NA75 395 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 MCUQ8NE86 351 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 BPIFB1Q8TDL5 484 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 DDI1Q8WTU0 396 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 ATXN2LQ8WWM7 1075 aaKnown RBP12.91□□□□□ -0.34
VPS52-220ENST00000493674 PPM1EQ8WY54 764 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 HLA-CQ95604 372 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 EXOC4Q96A65 974 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 E2F7Q96AV8 911 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 ASIC4Q96FT7 647 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 NECTIN4Q96NY8 510 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 FAM83CQ9BQN1 747 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 FEM1AQ9BSK4 669 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 LINC00597Q9H2U6 94 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 POMKQ9H5K3 350 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 UBE2ZQ9H832 354 aaPredicted RBP12.91□□□□□ -0.34
VPS52-220ENST00000493674 SP110Q9HB58 689 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 ETNK1Q9HBU6 452 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 ARFGAP3Q9NP61 516 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 RAB6BQ9NRW1 208 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 SEPT10Q9P0V9 454 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 CLEC4EQ9ULY5 219 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 WNT6Q9Y6F9 365 aa12.91□□□□□ -0.34
VPS52-220ENST00000493674 HEPACAM2A8MVW5 462 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 E7ESA3 106 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 H0Y626 953 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 HOXC11O43248 304 aaPredicted RBP12.9□□□□□ -0.34
VPS52-220ENST00000493674 CD160O95971 181 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 JCHAINP01591 159 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 CYBBP04839 570 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 HLA-DQB2P05538 268 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 LAMP2P13473 410 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 NFKB1P19838 968 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 PSMB4P28070 264 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 MZF1P28698 734 aaPredicted RBP12.9□□□□□ -0.34
VPS52-220ENST00000493674 HSPA9P38646 679 aaKnown RBP12.9□□□□□ -0.34
VPS52-220ENST00000493674 CSKP41240 450 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 MAGEA3P43357 314 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 OXCT1P55809 520 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 ARF5P84085 180 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 SLC10A7Q0GE19 358 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 LMAN2Q12907 356 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 SLC12A1Q13621 1099 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 CDH18Q13634 790 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 GAB4Q2WGN9 574 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 LY6G5CQ5SRR4 150 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 TMCO4Q5TGY1 634 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 RNF219Q5W0B1 726 aaPredicted RBP12.9□□□□□ -0.34
VPS52-220ENST00000493674 KCTD11Q693B1 232 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 ITPRIPL1Q6GPH6 555 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 ASTLQ6HA08 431 aaPredicted RBP12.9□□□□□ -0.34
VPS52-220ENST00000493674 TANGO2Q6ICL3 276 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 VITQ6UXI7 678 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 TPGS1Q6ZTW0 290 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 ZNF534Q76KX8 674 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 MFN1Q8IWA4 741 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 ZNF557Q8N988 423 aaPredicted RBP12.9□□□□□ -0.34
VPS52-220ENST00000493674 ELSPBP1Q96BH3 223 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 TADA1Q96BN2 335 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 SLC2A11Q9BYW1 496 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 GLOD4Q9HC38 313 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 ATP13A1Q9HD20 1204 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 ZNF446Q9NWS9 450 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 KIAA1522Q9P206 1035 aaPredicted RBP12.9□□□□□ -0.34
VPS52-220ENST00000493674 KLHL8Q9P2G9 620 aaPredicted RBP12.9□□□□□ -0.34
VPS52-220ENST00000493674 MTRF1LQ9UGC7 380 aaKnown RBP12.9□□□□□ -0.34
VPS52-220ENST00000493674 CD207Q9UJ71 328 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 FBXO10Q9UK96 956 aa12.9□□□□□ -0.34
VPS52-220ENST00000493674 A0A0C4DFX4 3053 aa12.9□□□□□ -0.35
VPS52-220ENST00000493674 LRRK1Q38SD2 2015 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 ERI2A8K979 691 aaKnown RBP12.89□□□□□ -0.35
VPS52-220ENST00000493674 SUN1O94901 812 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms