RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 TGM2P21980 687 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 NTSR1P30989 418 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 CXCR5P32302 372 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 VASPP50552 380 aaPredicted RBP12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 KLF1Q13351 362 aaPredicted RBP12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 TFDP2Q14188 446 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 FAM182AQ5T1J6 154 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 KIAA1211LQ6NV74 962 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 TMEM92Q6UXU6 159 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 B4GALNT4Q76KP1 1039 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 ZNF354CQ86Y25 554 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 CHPFQ8IZ52 775 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 SH2D3CQ8N5H7 860 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 FRS2Q8WU20 508 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 CARD9Q9H257 536 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 IPO11Q9UI26 975 aaKnown RBP12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 SLC25A13Q9UJS0 675 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 MMP17Q9ULZ9 603 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 HEY1Q9Y5J3 304 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 RAD54BQ9Y620 910 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 CHD5Q8TDI0 1954 aa12.36□□□□□ -0.43
RHBDF1-211ENST00000493647 MUC3AQ02505 3323 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 A0A1W2PQF6 199 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 AVPR2P30518 371 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 GARSP41250 739 aaKnown RBP12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 SERPINH1P50454 418 aaKnown RBP12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 SATB1Q01826 763 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 IL10RBQ08334 325 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 CYTH1Q15438 398 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 DLG2Q15700 870 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 HNRNPA1L2Q32P51 320 aaKnown RBP12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 HSF5Q4G112 596 aaPredicted RBP12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 SEL1L2Q5TEA6 688 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 SERPINA13PQ6UXR4 307 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 NYAP1Q6ZVC0 841 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 SPEM1Q8N4L4 309 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 ATPAF2Q8N5M1 289 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 KDM1BQ8NB78 822 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 COG1Q8WTW3 980 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 ZNF419Q96HQ0 510 aaPredicted RBP12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 LGMNQ99538 433 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 FAM118BQ9BPY3 351 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 PLA2G4CQ9UP65 541 aa12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 R3HDM2Q9Y2K5 976 aaKnown RBP12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 FCF1Q9Y324 198 aaKnown RBP12.35□□□□□ -0.43
RHBDF1-211ENST00000493647 NYNRINQ9P2P1 1898 aaKnown RBP12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 CXorf51AA0A1B0GTR3 108 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 PRR33A8MZF0 331 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 APOC4-APOC2K7ER74 178 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 DLL1O00548 723 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 NPC1O15118 1278 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 CEP104O60308 925 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 TMCC1O94876 653 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 APOC2P02655 101 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 EPHX1P07099 455 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 HOXB2P14652 356 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 CETN2P41208 172 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 MAGEA9P43362 315 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 NR2C2P49116 596 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 ST8SIA6P61647 398 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 OTUD4Q01804 1114 aaKnown RBP12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 SLC20A2Q08357 652 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 NOMO1Q15155 1222 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 SIX1Q15475 284 aaPredicted RBP12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 TMEM31Q5JXX7 168 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 EOGTQ5NDL2 527 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 RETSATQ6NUM9 610 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 C22orf39Q6P5X5 142 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 Q6ZVU0 165 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 SYT13Q7L8C5 426 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 TRMT11Q7Z4G4 463 aaKnown RBP12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 SLC13A5Q86YT5 568 aaPredicted RBP12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 ATP11CQ8NB49 1132 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 DTWD2Q8NBA8 298 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 CCDC26Q8TAB7 109 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 ACTL9Q8TC94 416 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 PTPRN2Q92932 1015 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 VOPP1Q96AW1 172 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 TSGA13Q96PP4 275 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 OSBPL9Q96SU4 736 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 TNKS2Q9H2K2 1166 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 SP110Q9HB58 689 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 PRSS16Q9NQE7 514 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 SMARCAL1Q9NZC9 954 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 LHX3Q9UBR4 397 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 UBA2Q9UBT2 640 aaPredicted RBP12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 HPCAL4Q9UM19 191 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 SNX12Q9UMY4 172 aa12.34□□□□□ -0.43
RHBDF1-211ENST00000493647 ATG2BQ96BY7 2078 aa12.33□□□□□ -0.44
RHBDF1-211ENST00000493647 ZSCAN5CA6NGD5 496 aaPredicted RBP12.33□□□□□ -0.44
RHBDF1-211ENST00000493647 K7ESF4 209 aa12.33□□□□□ -0.44
RHBDF1-211ENST00000493647 MUSKO15146 869 aa12.33□□□□□ -0.44
RHBDF1-211ENST00000493647 ZNF185O15231 689 aa12.33□□□□□ -0.44
RHBDF1-211ENST00000493647 SIN3BO75182 1162 aa12.33□□□□□ -0.44
RHBDF1-211ENST00000493647 TJP3O95049 919 aa12.33□□□□□ -0.44
RHBDF1-211ENST00000493647 MX2P20592 715 aa12.33□□□□□ -0.44
RHBDF1-211ENST00000493647 MSNP26038 577 aaKnown RBP12.33□□□□□ -0.44
RHBDF1-211ENST00000493647 RGRP47804 291 aa12.33□□□□□ -0.44
RHBDF1-211ENST00000493647 CLCN6P51797 869 aa12.33□□□□□ -0.44
RHBDF1-211ENST00000493647 ETF1P62495 437 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms