RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 SLC30A1Q9Y6M5 507 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 NRAPQ86VF7 1730 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 ADAMTSL1Q8N6G6 1762 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 A0A096LPK6 155 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 RNF103-CHMP3A0A140T963 221 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 KPNA4O00629 521 aaPredicted RBP11.89□□□□□ -0.51
HDAC4-210ENST00000493582 B4GAT1O43505 415 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 PRPSAP2O60256 369 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 GRIA4P48058 902 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 NME5P56597 212 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 GBE1Q04446 702 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 ENPEPQ07075 957 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 PLCL1Q15111 1095 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 CLPPQ16740 277 aaPredicted RBP11.89□□□□□ -0.51
HDAC4-210ENST00000493582 PRR5LQ6MZQ0 368 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 LRRC8EQ6NSJ5 796 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 BPIFB6Q8NFQ5 453 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 TNIP2Q8NFZ5 429 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 ATP6V0A1Q93050 837 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 TMEM143Q96AN5 459 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 MASTLQ96GX5 879 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 PIWIL1Q96J94 861 aaKnown RBP11.89□□□□□ -0.51
HDAC4-210ENST00000493582 CCDC138Q96M89 665 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 ADPGKQ9BRR6 497 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 SLC39A3Q9BRY0 314 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 MAGEB5Q9BZ81 275 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 CCPG1Q9ULG6 757 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 RAP2CQ9Y3L5 183 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 UBIAD1Q9Y5Z9 338 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 CNTNAP4Q9C0A0 1308 aa11.89□□□□□ -0.51
HDAC4-210ENST00000493582 TMEM114B3SHH9 223 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 TK2O00142 265 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 PFDN6O15212 129 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 PAPSS1O43252 624 aaPredicted RBP11.88□□□□□ -0.51
HDAC4-210ENST00000493582 CSE1LP55060 971 aaKnown RBP11.88□□□□□ -0.51
HDAC4-210ENST00000493582 CDH8P55286 799 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 PDK2Q15119 407 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 PGS1Q32NB8 556 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 CNTD1Q8N815 330 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 NETO2Q8NC67 525 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 ACVR1CQ8NER5 493 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 ARNTL2Q8WYA1 636 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 ALPK1Q96QP1 1244 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 C1orf50Q9BV19 199 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 TDRD1Q9BXT4 1180 aaKnown RBP11.88□□□□□ -0.51
HDAC4-210ENST00000493582 TCRBV3S1A0A5B6 114 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 KPNA7A9QM74 516 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 NOL3O60936 208 aaKnown RBP11.88□□□□□ -0.51
HDAC4-210ENST00000493582 EDN1P05305 212 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 PDGFRAP16234 1089 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 TKTP29401 623 aaKnown RBP11.88□□□□□ -0.51
HDAC4-210ENST00000493582 TTKP33981 857 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 OPRL1P41146 370 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 FSTL4Q6MZW2 842 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 TTC30AQ86WT1 665 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 RXFP2Q8WXD0 754 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 TCF12Q99081 682 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 CGREF1Q99674 301 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 EFHD1Q9BUP0 239 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 CEP41Q9BYV8 373 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 ZC3H12CQ9C0D7 883 aaKnown RBP11.88□□□□□ -0.51
HDAC4-210ENST00000493582 NIF3L1Q9GZT8 377 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 PDZD7Q9H5P4 517 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 NMRAL1Q9HBL8 299 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 FIS1Q9Y3D6 152 aa11.88□□□□□ -0.51
HDAC4-210ENST00000493582 HEATR9A2RTY3 570 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 TRIM64BA6NI03 449 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 CLOCKO15516 846 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 CLPXO76031 633 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 IL18RAPO95256 599 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 SAT1P21673 171 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 GLRBP48167 497 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 BFSP2Q13515 415 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 OLIG2Q13516 323 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 DNASE1L3Q13609 305 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 STEAP4Q687X5 459 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 CYS1Q717R9 158 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 ZNF354CQ86Y25 554 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 EPHX4Q8IUS5 362 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 CPXCR1Q8N123 301 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 TMEM130Q8N3G9 435 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 ANKFN1Q8N957 763 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 CSF3RQ99062 836 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 AGAP2Q99490 1192 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 COA1Q9GZY4 146 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 NGRNQ9NPE2 291 aaKnown RBP11.87□□□□□ -0.51
HDAC4-210ENST00000493582 OXSMQ9NWU1 459 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 DGKBQ9Y6T7 804 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 CCDC162PA2VCL2 907 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 TRIM64A6NGJ6 449 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 LRRIQ4A6NIV6 560 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 A6NL46 340 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 FAM47E-STBD1D6RA91 191 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 MYO1DO94832 1006 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 ZBTB7AO95365 584 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 BMP2P12643 396 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 TPSB2P20231 275 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 GNL1P36915 607 aaPredicted RBP11.87□□□□□ -0.51
HDAC4-210ENST00000493582 GP5P40197 560 aa11.87□□□□□ -0.51
HDAC4-210ENST00000493582 FSTL1Q12841 308 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms