RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 CDC23Q9UJX2 597 aa11.79□□□□□ -0.52
LSM2-214ENST00000493387 NDRG2Q9UN36 371 aaKnown RBP11.79□□□□□ -0.52
LSM2-214ENST00000493387 COL4A2P08572 1712 aa11.79□□□□□ -0.52
LSM2-214ENST00000493387 CHD5Q8TDI0 1954 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 TCRBV7S2A1N4TA0A589 114 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 BCLAF3A2AJT9 711 aaKnown RBP11.78□□□□□ -0.52
LSM2-214ENST00000493387 FAM170BA6NMN3 283 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 STK25O00506 426 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 KRIT1O00522 736 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 MATN3O15232 486 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 ATP9BO43861 1147 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 NEBLO76041 1014 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 STK10O94804 968 aaKnown RBP11.78□□□□□ -0.52
LSM2-214ENST00000493387 RBP3P10745 1247 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 CHRNB1P11230 501 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 STIP1P31948 543 aaKnown RBP11.78□□□□□ -0.52
LSM2-214ENST00000493387 MAGEA9P43362 315 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 KIR2DL1P43626 348 aaPredicted RBP11.78□□□□□ -0.52
LSM2-214ENST00000493387 SERPINH1P50454 418 aaKnown RBP11.78□□□□□ -0.52
LSM2-214ENST00000493387 ARF5P84085 180 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 LMNB2Q03252 620 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 MESP2Q0VG99 397 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 AP1B1Q10567 949 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 CCINQ13939 588 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 UBXN2BQ14CS0 331 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 PRKD1Q15139 912 aaPredicted RBP11.78□□□□□ -0.52
LSM2-214ENST00000493387 WHAMMP3Q1A5X7 153 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 FNDC3BQ53EP0 1204 aaKnown RBP11.78□□□□□ -0.52
LSM2-214ENST00000493387 MARC1Q5VT66 337 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 TRIM67Q6ZTA4 783 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 ADAT2Q7Z6V5 191 aaKnown RBP11.78□□□□□ -0.52
LSM2-214ENST00000493387 ZC3H18Q86VM9 953 aaKnown RBP11.78□□□□□ -0.52
LSM2-214ENST00000493387 TP53INP2Q8IXH6 220 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 SH2D3CQ8N5H7 860 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 ZNF513Q8N8E2 541 aaPredicted RBP11.78□□□□□ -0.52
LSM2-214ENST00000493387 ATP11CQ8NB49 1132 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 SLC35B2Q8TB61 432 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 MAML1Q92585 1016 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 NKD2Q969F2 451 aaPredicted RBP11.78□□□□□ -0.52
LSM2-214ENST00000493387 ISG20Q96AZ6 181 aaKnown RBP11.78□□□□□ -0.52
LSM2-214ENST00000493387 CAPZA3Q96KX2 299 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 RUNDC3BQ96NL0 473 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 QKIQ96PU8 341 aaKnown RBP eCLIP11.78□□□□□ -0.52
LSM2-214ENST00000493387 VAT1Q99536 393 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 LGMNQ99538 433 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 IER2Q9BTL4 223 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 MFSD1Q9H3U5 465 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 LMAN1LQ9HAT1 526 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 PDFQ9HBH1 243 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 SEPT3Q9UH03 358 aa11.78□□□□□ -0.52
LSM2-214ENST00000493387 FEZ2Q9UHY8 353 aaPredicted RBP11.78□□□□□ -0.52
LSM2-214ENST00000493387 DRG1Q9Y295 367 aaKnown RBP11.78□□□□□ -0.52
LSM2-214ENST00000493387 NCOR1O75376 2440 aa11.77□□□□□ -0.52
LSM2-214ENST00000493387 CCDC188H7C350 402 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 J3KR12 359 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 LIASO43766 372 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 ATG13O75143 517 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 MAP3K6O95382 1288 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 CCNB1P14635 433 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 CD72P21854 359 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 GLDCP23378 1020 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 TARSP26639 723 aaKnown RBP11.77□□□□□ -0.53
LSM2-214ENST00000493387 NTSR1P30989 418 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 CTSOP43234 321 aaPredicted RBP11.77□□□□□ -0.53
LSM2-214ENST00000493387 IFI35P80217 286 aaPredicted RBP11.77□□□□□ -0.53
LSM2-214ENST00000493387 ENPP2Q13822 863 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 BYSLQ13895 437 aaKnown RBP11.77□□□□□ -0.53
LSM2-214ENST00000493387 ZNF234Q14588 700 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 LBRQ14739 615 aaKnown RBP11.77□□□□□ -0.53
LSM2-214ENST00000493387 SIX1Q15475 284 aaPredicted RBP11.77□□□□□ -0.53
LSM2-214ENST00000493387 CYP1B1Q16678 543 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 PTPRNQ16849 979 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 EOGTQ5NDL2 527 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 DNTTIP2Q5QJE6 756 aaKnown RBP11.77□□□□□ -0.53
LSM2-214ENST00000493387 HEATR6Q6AI08 1181 aaKnown RBP11.77□□□□□ -0.53
LSM2-214ENST00000493387 SERPINA13PQ6UXR4 307 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 ARHGAP36Q6ZRI8 547 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 PLPP6Q8IY26 295 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 CHPFQ8IZ52 775 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 ZNF687Q8N1G0 1237 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 TEX26Q8N6G2 289 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 PCDH20Q8N6Y1 951 aaKnown RBP11.77□□□□□ -0.53
LSM2-214ENST00000493387 NETO2Q8NC67 525 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 MNS1Q8NEH6 495 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 USP33Q8TEY7 942 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 CYB5D2Q8WUJ1 264 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 C1orf54Q8WWF1 131 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 SORCS1Q8WY21 1168 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 MAGOHBQ96A72 148 aaKnown RBP11.77□□□□□ -0.53
LSM2-214ENST00000493387 CLDN23Q96B33 292 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 MRGPRX3Q96LB0 322 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 CCDC114Q96M63 670 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 CINPQ9BW66 212 aaPredicted RBP11.77□□□□□ -0.53
LSM2-214ENST00000493387 R3HDM2Q9Y2K5 976 aaKnown RBP11.77□□□□□ -0.53
LSM2-214ENST00000493387 SIT1Q9Y3P8 196 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 FARP1Q9Y4F1 1045 aaPredicted RBP11.77□□□□□ -0.53
LSM2-214ENST00000493387 COL4A3Q01955 1670 aa11.77□□□□□ -0.53
LSM2-214ENST00000493387 KIAA1549LQ6ZVL6 1849 aa11.76□□□□□ -0.53
LSM2-214ENST00000493387 EDDM13A0A1B0GTR0 161 aa11.76□□□□□ -0.53
LSM2-214ENST00000493387 TARSL2A2RTX5 802 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms