RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 UBA2Q9UBT2 640 aaPredicted RBP8.31□□□□□ -1.08
TM4SF1-204ENST00000493348 EBF1Q9UH73 591 aa8.31□□□□□ -1.08
TM4SF1-204ENST00000493348 INTS6Q9UL03 887 aaKnown RBP8.31□□□□□ -1.08
TM4SF1-204ENST00000493348 SCML1Q9UN30 329 aa8.31□□□□□ -1.08
TM4SF1-204ENST00000493348 ARIH1Q9Y4X5 557 aaPredicted RBP8.31□□□□□ -1.08
TM4SF1-204ENST00000493348 FANCMQ8IYD8 2048 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 CXorf51AA0A1B0GTR3 108 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 CCDC66A2RUB6 948 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 TTC34A8MYJ7 566 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 K7ESF4 209 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 APOL1O14791 398 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 KDELR3O43731 214 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 SIN3BO75182 1162 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 PALMO75781 387 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 RHOBTB1O94844 696 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 ZRANB2O95218 330 aaKnown RBP eCLIP8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 IGSF6O95976 241 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 ADH1BP00325 375 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 IL1BP01584 269 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 TCF4P15884 667 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 AMPD1P23109 780 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 KDELR1P24390 212 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 CTNNA2P26232 953 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 OXTRP30559 389 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 ACVRL1P37023 503 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 SERPINH1P50454 418 aaKnown RBP8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 PAPOLAP51003 745 aaKnown RBP8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 RENBPP51606 427 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 RWDD2BP57060 319 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 TAS2R40P59535 323 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 RHOAP61586 193 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 ZBTB16Q05516 673 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 TCF15Q12870 199 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 SERINC3Q13530 473 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 DPYSL3Q14195 570 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 ELAVL3Q14576 367 aaKnown RBP8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 ZNF235Q14590 738 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 PTPRNQ16849 979 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 ANKRD20A8PQ5CZ79 823 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 CFAP58Q5T655 872 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 TMCO4Q5TGY1 634 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 LINGO4Q6UY18 593 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 KBTBD6Q86V97 674 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 LRRC49Q8IUZ0 686 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 RCOR2Q8IZ40 523 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 PCDH20Q8N6Y1 951 aaKnown RBP8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 MDGA1Q8NFP4 955 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 UBE2Q2Q8WVN8 375 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 RNF25Q96BH1 459 aaPredicted RBP8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 HMCESQ96FZ2 354 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 P2RY11Q96G91 374 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 LMLNQ96KR4 655 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 CINPQ9BW66 212 aaPredicted RBP8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 CEP44Q9C0F1 390 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 TMEM245Q9H330 911 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 LZTFL1Q9NQ48 299 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 NDFIP2Q9NV92 336 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 POLR3BQ9NW08 1133 aaPredicted RBP8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 SLCO3A1Q9UIG8 710 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 GMEB2Q9UKD1 530 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 CYP8B1Q9UNU6 501 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 TFR2Q9UP52 801 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 HS3ST2Q9Y278 367 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 HYOU1Q9Y4L1 999 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 ADGRG1Q9Y653 693 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 R4GN57 208 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 MUC6Q6W4X9 2439 aa8.3□□□□□ -1.08
TM4SF1-204ENST00000493348 A0A1W2PQF6 199 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 GOLGA6L9A6NEM1 432 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 MIF4GDA9UHW6 222 aaKnown RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 PPP1R12AO14974 1030 aaPredicted RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 ALOX15BO15296 676 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 ATP9BO43861 1147 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 RNASEH2AO75792 299 aaKnown RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 PRNPP04156 253 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 SRCP12931 536 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 GABRG2P18507 467 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 NDUFV2P19404 249 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 XPAP23025 273 aaPredicted RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 GLDCP23378 1020 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 PSMD8P48556 350 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 RPL6Q02878 288 aaKnown RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 ITKQ08881 620 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 MMRN1Q13201 1228 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 CAMK2GQ13555 558 aaPredicted RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 ENPP2Q13822 863 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 DPYSQ14117 519 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 RFTN1Q14699 578 aaPredicted RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 ATP13A4Q4VNC1 1196 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 INO80DQ53TQ3 878 aaPredicted RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 TFDP3Q5H9I0 405 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 SEL1L2Q5TEA6 688 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 KAZNQ674X7 775 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 TXNRD3NBQ6F5E7 133 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 TIGD7Q6NT04 549 aaPredicted RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 KIAA1211LQ6NV74 962 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 C22orf39Q6P5X5 142 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 Q6ZVU0 165 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 CYP4V2Q6ZWL3 525 aaPredicted RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 LPCAT2Q7L5N7 544 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms