RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PRRG1O14668 218 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 COCHO43405 550 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 USP12O75317 370 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 USP1O94782 785 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 PEX11BO96011 259 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 HLA-DQB2P05538 268 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 KCNQ1P51787 676 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 TNK2Q07912 1038 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 MGAT5Q09328 741 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 DNAJC3Q13217 504 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 POLD3Q15054 466 aaPredicted RBP14.3□□□□□ -0.12
PTPN7-216ENST00000492977 HHATQ5VTY9 493 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 RGS9BPQ6ZS82 235 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 CCDC117Q8IWD4 279 aaPredicted RBP14.3□□□□□ -0.12
PTPN7-216ENST00000492977 CACNA2D3Q8IZS8 1091 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 NSMCE1Q8WV22 266 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 HMCESQ96FZ2 354 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 SEC16BQ96JE7 1060 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 SERAC1Q96JX3 654 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 TGS1Q96RS0 853 aaKnown RBP14.3□□□□□ -0.12
PTPN7-216ENST00000492977 ENTPD7Q9NQZ7 604 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 UBP1Q9NZI7 540 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 SSX2IPQ9Y2D8 614 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 FAM169AQ9Y6X4 670 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.3□□□□□ -0.12
PTPN7-216ENST00000492977 GOLGA6L7A0A1B0GV03 622 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 RAMP2O60895 175 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 GJB5O95377 273 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 OR1E1P30953 314 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 EPHB3P54753 998 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 IL10RBQ08334 325 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 OLIG2Q13516 323 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 SLC1A5Q15758 541 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 SEPT7Q16181 437 aaKnown RBP14.3□□□□□ -0.12
PTPN7-216ENST00000492977 ANKRD20A4Q4UJ75 823 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 MARC1Q5VT66 337 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 ARMC3Q5W041 872 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 TIFABQ6ZNK6 161 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 LGI2Q8N0V4 545 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 TEX26Q8N6G2 289 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.3□□□□□ -0.12
PTPN7-216ENST00000492977 SPATA22Q8NHS9 363 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 ZNF419Q96HQ0 510 aaPredicted RBP14.3□□□□□ -0.12
PTPN7-216ENST00000492977 APOPT1Q96IL0 206 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 PAIP2Q9BPZ3 127 aaKnown RBP14.3□□□□□ -0.12
PTPN7-216ENST00000492977 TBL1YQ9BQ87 522 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 SLC25A51Q9H1U9 297 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 SP110Q9HB58 689 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 RXFP1Q9HBX9 757 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 SOX13Q9UN79 622 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 GOLGA8RI6L899 631 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 UGT1A9O60656 530 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 LPXNO60711 386 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 LILRB3O75022 631 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 OAS1P00973 400 aaKnown RBP14.29□□□□□ -0.12
PTPN7-216ENST00000492977 TAC1P20366 129 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 ADRA1AP35348 466 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 NEK3P51956 506 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 TWF1Q12792 350 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 MPP3Q13368 585 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 SERINC3Q13530 473 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 PDK4Q16654 411 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 FAM133BQ5BKY9 247 aaKnown RBP14.29□□□□□ -0.12
PTPN7-216ENST00000492977 RABGAP1LQ5R372 815 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 CERCAMQ5T4B2 595 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 LVRNQ6Q4G3 990 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 OTOP2Q7RTS6 562 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 DNAJB7Q7Z6W7 309 aaPredicted RBP14.29□□□□□ -0.12
PTPN7-216ENST00000492977 DNAJC5GQ8N7S2 189 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 TCP10LQ8TDR4 215 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 CERS2Q96G23 380 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 FCRL3Q96P31 734 aaPredicted RBP14.29□□□□□ -0.12
PTPN7-216ENST00000492977 UGT1A7Q9HAW7 530 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 UGT1A10Q9HAW8 530 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 UGT1A8Q9HAW9 530 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 MKS1Q9NXB0 559 aa14.29□□□□□ -0.12
PTPN7-216ENST00000492977 ATXN2Q99700 1313 aaKnown RBP14.29□□□□□ -0.12
PTPN7-216ENST00000492977 J3KR12 359 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 ATP9BO43861 1147 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 FGF18O76093 207 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 MT-CYBP00156 380 aaPredicted RBP14.28□□□□□ -0.12
PTPN7-216ENST00000492977 FOXN2P32314 431 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 CCNFP41002 786 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 CDH4P55283 916 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 HTRA4P83105 476 aaPredicted RBP14.28□□□□□ -0.12
PTPN7-216ENST00000492977 PLD1Q13393 1074 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 PPIGQ13427 754 aaKnown RBP eCLIP14.28□□□□□ -0.12
PTPN7-216ENST00000492977 PABPC1LQ4VXU2 614 aaKnown RBP14.28□□□□□ -0.12
PTPN7-216ENST00000492977 C6orf89Q6UWU4 347 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 ITIH5Q86UX2 942 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 RASSF3Q86WH2 238 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 UNC5BQ8IZJ1 945 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 FIBCD1Q8N539 461 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 ANKS4BQ8N8V4 417 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 CCDC197Q8NCU1 140 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 PTCD2Q8WV60 388 aaKnown RBP14.28□□□□□ -0.12
PTPN7-216ENST00000492977 PSMG2Q969U7 264 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 ZNF669Q96BR6 464 aaPredicted RBP14.28□□□□□ -0.12
PTPN7-216ENST00000492977 GRAMD1AQ96CP6 724 aa14.28□□□□□ -0.12
PTPN7-216ENST00000492977 CABS1Q96KC9 395 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms