RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 K7ERQ8 282 aa27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 ZNF883P0CG24 379 aa27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 RRM1P23921 792 aa27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 MAPKAPK2P49137 400 aa27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 RPL7AP62424 266 aaKnown RBP27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 RACK1P63244 317 aaKnown RBP27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 SCAPQ12770 1279 aa27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 HLA-BQ31612 363 aa27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 PPP1R15BQ5SWA1 713 aa27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 LINGO4Q6UY18 593 aa27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 OR2A12Q8NGT7 310 aa27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 TBC1D31Q96DN5 1066 aa27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 CNPY3Q9BT09 278 aa27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 HAUS4Q9H6D7 363 aa27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 TMEM248Q9NWD8 314 aa27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 ANKRD6Q9Y2G4 727 aa27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 DOCK4Q8N1I0 1966 aa27.73■■■□□ 2.03
SH3GL3-204ENST00000492099 TBC1D3DA0A087WVF3 549 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 TBC1D3IA0A087WXS9 549 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 TBC1D3EA0A087X179 549 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 TBC1D3KA0A087X1G2 549 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 CXorf51AA0A1B0GTR3 108 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 TBC1D3FA6NER0 549 aaPredicted RBP27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 C10orf142B7Z368 130 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 TBC1D3LB9A6J9 549 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 FAM72CH0Y354 149 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 CCP110O43303 1012 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 LRIG2O94898 1065 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 TBC1D3HP0C7X1 549 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 GLDCP23378 1020 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 PRKCIP41743 596 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 AIF1P55008 147 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 SHC2P98077 582 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 FIGNQ5HY92 759 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 FAM72AQ5TYM5 149 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 TBC1D3GQ6DHY5 549 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 TBC1D3CQ6IPX1 549 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 FAM72DQ6L9T8 149 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 ADAT2Q7Z6V5 191 aaKnown RBP27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 NLRP14Q86W24 1093 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 FAM72BQ86X60 149 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 TBC1D3Q8IZP1 549 aaPredicted RBP27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 TAS2R14Q9NYV8 317 aa27.72■■■□□ 2.03
SH3GL3-204ENST00000492099 SMAD6O43541 496 aaKnown RBP27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 ZMPSTE24O75844 475 aa27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 L1CAMP32004 1257 aa27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 CHRNA3P32297 505 aa27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 RECQLP46063 649 aaPredicted RBP27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 METAP1P53582 386 aa27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 CCDC15Q0P6D6 951 aa27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 KIF19Q2TAC6 998 aa27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 EFHC2Q5JST6 749 aa27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 SCYL2Q6P3W7 929 aa27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 C22orf39Q6P5X5 142 aa27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 LUZP1Q86V48 1076 aa27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 TMIEQ8NEW7 156 aa27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 SKA1Q96BD8 255 aa27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 ACE2Q9BYF1 805 aaPredicted RBP27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 CEP44Q9C0F1 390 aa27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 TTYH3Q9C0H2 523 aa27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 PARVAQ9NVD7 372 aa27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 NYNRINQ9P2P1 1898 aaKnown RBP27.71■■■□□ 2.03
SH3GL3-204ENST00000492099 TMCO5BA8MYB1 307 aa27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 PLRG1O43660 514 aaKnown RBP27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 PRNPP04156 253 aa27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 GZMAP12544 262 aa27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 SERPINH1P50454 418 aaKnown RBP27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 FANCCQ00597 558 aa27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 KLHL30Q0D2K2 578 aa27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 CNTN1Q12860 1018 aa27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 ZNF571Q7Z3V5 609 aaPredicted RBP27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 MAGEB5Q9BZ81 275 aa27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 MAGEH1Q9H213 219 aa27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 IL21RQ9HBE5 538 aa27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 TM7SF3Q9NS93 570 aa27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 DNAI1Q9UI46 699 aa27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 NEU3Q9UQ49 428 aa27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 SNX11Q9Y5W9 270 aa27.7■■■□□ 2.02
SH3GL3-204ENST00000492099 PCNX2A6NKB5 2137 aa27.69■■■□□ 2.02
SH3GL3-204ENST00000492099 PLK4O00444 970 aa27.69■■■□□ 2.02
SH3GL3-204ENST00000492099 VILLO15195 856 aa27.69■■■□□ 2.02
SH3GL3-204ENST00000492099 SH3BP5O60239 455 aa27.69■■■□□ 2.02
SH3GL3-204ENST00000492099 RTN2O75298 545 aa27.69■■■□□ 2.02
SH3GL3-204ENST00000492099 MAMLD1Q13495 774 aa27.69■■■□□ 2.02
SH3GL3-204ENST00000492099 POM121L1PQ3SYA9 428 aa27.69■■■□□ 2.02
SH3GL3-204ENST00000492099 AGBL4Q5VU57 503 aa27.69■■■□□ 2.02
SH3GL3-204ENST00000492099 PCDH20Q8N6Y1 951 aaKnown RBP27.69■■■□□ 2.02
SH3GL3-204ENST00000492099 EBF2Q9HAK2 575 aa27.69■■■□□ 2.02
SH3GL3-204ENST00000492099 NDFIP2Q9NV92 336 aa27.69■■■□□ 2.02
SH3GL3-204ENST00000492099 HPCAL4Q9UM19 191 aa27.69■■■□□ 2.02
SH3GL3-204ENST00000492099 FNDC3AQ9Y2H6 1198 aaKnown RBP27.69■■■□□ 2.02
SH3GL3-204ENST00000492099 PCDHGB2Q9Y5G2 931 aa27.69■■■□□ 2.02
SH3GL3-204ENST00000492099 GOLGA6L19H0YKK7 550 aa27.68■■■□□ 2.02
SH3GL3-204ENST00000492099 LATO43561 262 aa27.68■■■□□ 2.02
SH3GL3-204ENST00000492099 CTSLP07711 333 aa27.68■■■□□ 2.02
SH3GL3-204ENST00000492099 NUDT1P36639 197 aa27.68■■■□□ 2.02
SH3GL3-204ENST00000492099 UBASH3AP57075 661 aa27.68■■■□□ 2.02
SH3GL3-204ENST00000492099 C21orf59P57076 290 aa27.68■■■□□ 2.02
SH3GL3-204ENST00000492099 GEMIN4P57678 1058 aaKnown RBP27.68■■■□□ 2.02
SH3GL3-204ENST00000492099 SIM1P81133 766 aaPredicted RBP27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms