RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 NT5C3BQ969T7 300 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 AZIN2Q96A70 460 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 PRICKLE1Q96MT3 831 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-219ENST00000491747 TRIM62Q9BVG3 475 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 ANLNQ9NQW6 1124 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 METTL5Q9NRN9 209 aaKnown RBP9.65□□□□□ -0.86
BRCA1-219ENST00000491747 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.65□□□□□ -0.86
BRCA1-219ENST00000491747 DEC1Q9P2X7 70 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 MYO18AQ92614 2054 aaKnown RBP9.65□□□□□ -0.86
BRCA1-219ENST00000491747 USP34Q70CQ2 3546 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 TCRBV5S1A1TA0A578 114 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 KCNU1A8MYU2 1149 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 CHURC1-FNTBB4DL54 471 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 I6L893 689 aaPredicted RBP9.65□□□□□ -0.87
BRCA1-219ENST00000491747 K7ESF4 209 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 M0QYT0 321 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 SNX3O60493 162 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 LATS1O95835 1130 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 FTLP02792 175 aaPredicted RBP9.65□□□□□ -0.87
BRCA1-219ENST00000491747 APODP05090 189 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 HOXD9P28356 352 aaPredicted RBP9.65□□□□□ -0.87
BRCA1-219ENST00000491747 SCNN1AP37088 669 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 GRIA2P42262 883 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 CXCL12P48061 93 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 CALCOCO2Q13137 446 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 NME3Q13232 169 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 AUHQ13825 339 aaKnown RBP9.65□□□□□ -0.87
BRCA1-219ENST00000491747 CYP1B1Q16678 543 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 FBXO43Q4G163 708 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 PIK3R6Q5UE93 754 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 TRMT10CQ7L0Y3 403 aaKnown RBP9.65□□□□□ -0.87
BRCA1-219ENST00000491747 TERB1Q8NA31 727 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 DDI1Q8WTU0 396 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 ATOH1Q92858 354 aaPredicted RBP9.65□□□□□ -0.87
BRCA1-219ENST00000491747 MIEF2Q96C03 454 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 CFAP57Q96MR6 1250 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 TBCBQ99426 244 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 PLCD4Q9BRC7 762 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 PIGVQ9NUD9 493 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 DDIT4Q9NX09 232 aa9.65□□□□□ -0.87
BRCA1-219ENST00000491747 VPS13AQ96RL7 3174 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 SUN1O94901 812 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 TIE1P35590 1138 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 NSFP46459 744 aaKnown RBP9.64□□□□□ -0.87
BRCA1-219ENST00000491747 SLCO1A2P46721 670 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 DGKGP49619 791 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 SULT1E1P49888 294 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 CLNS1AP54105 237 aaKnown RBP9.64□□□□□ -0.87
BRCA1-219ENST00000491747 GRAMD4Q6IC98 578 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 ACAD10Q6JQN1 1059 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 BNIPLQ7Z465 357 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 TBC1D1Q86TI0 1168 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-219ENST00000491747 CCDC33Q8N5R6 958 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 WFDC5Q8TCV5 224 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 KRT35Q92764 455 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 NELL1Q92832 810 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 ART4Q93070 314 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 TBC1D31Q96DN5 1066 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 IER2Q9BTL4 223 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 TMPRSS4Q9NRS4 437 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 ADAM22Q9P0K1 906 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 FBXO4Q9UKT5 387 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 PCDHA3Q9Y5H8 950 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 R4GN57 208 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 TBC1D3BA6NDS4 549 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-219ENST00000491747 HNRNPLP14866 589 aaKnown RBP eCLIP9.64□□□□□ -0.87
BRCA1-219ENST00000491747 COMTP21964 271 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 COILP38432 576 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-219ENST00000491747 TNFRSF4P43489 277 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 SLC11A2P49281 568 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 CCR3P51677 355 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 GEN1Q17RS7 908 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 MPPE1Q53F39 396 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 SH3PXD2AQ5TCZ1 1133 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 RAP1GAP2Q684P5 730 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 AADACL2Q6P093 401 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 TTC27Q6P3X3 843 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 ALLCQ8N6M5 410 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 IL17RCQ8NAC3 791 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 UHMK1Q8TAS1 419 aaKnown RBP9.64□□□□□ -0.87
BRCA1-219ENST00000491747 TMA16Q96EY4 203 aaKnown RBP9.64□□□□□ -0.87
BRCA1-219ENST00000491747 SERPINB12Q96P63 405 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 EBF2Q9HAK2 575 aa9.64□□□□□ -0.87
BRCA1-219ENST00000491747 MUC22E2RYF6 1773 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-219ENST00000491747 TMEM110-MUSTN1A8MSY1 372 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 TBL1XO60907 577 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 RTN2O75298 545 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 MTA2O94776 668 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 PAPSS2O95340 614 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-219ENST00000491747 ECEL1O95672 775 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 CYBBP04839 570 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 PEX5P50542 639 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 RPS24P62847 133 aaKnown RBP9.63□□□□□ -0.87
BRCA1-219ENST00000491747 MESDQ14696 234 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 C15orf59Q2T9L4 293 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-219ENST00000491747 SLC25A52Q3SY17 297 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 CCDC14Q49A88 953 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 MS4A13Q5J8X5 152 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 ARTNQ5T4W7 220 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms