RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 SETD3Q86TU7 594 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-220ENST00000491319 TRIM69Q86WT6 500 aa16.1■□□□□ 0.17
SMPD4-220ENST00000491319 SPATS2Q86XZ4 545 aaKnown RBP16.1■□□□□ 0.17
SMPD4-220ENST00000491319 GALNT15Q8N3T1 639 aa16.1■□□□□ 0.17
SMPD4-220ENST00000491319 DCAF4L2Q8NA75 395 aa16.1■□□□□ 0.17
SMPD4-220ENST00000491319 ATP11CQ8NB49 1132 aa16.1■□□□□ 0.17
SMPD4-220ENST00000491319 EPS8L1Q8TE68 723 aa16.1■□□□□ 0.17
SMPD4-220ENST00000491319 CPA5Q8WXQ8 436 aa16.1■□□□□ 0.17
SMPD4-220ENST00000491319 CFAP57Q96MR6 1250 aa16.1■□□□□ 0.17
SMPD4-220ENST00000491319 C2orf49Q9BVC5 232 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-220ENST00000491319 TAB2Q9NYJ8 693 aa16.1■□□□□ 0.17
SMPD4-220ENST00000491319 CA5BQ9Y2D0 317 aa16.1■□□□□ 0.17
SMPD4-220ENST00000491319 IGLV3-10A0A075B6K4 115 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 DRGXA6NNA5 263 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 E9PAM4 449 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 RNF103O00237 685 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 ENC1O14682 589 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 YKT6O15498 198 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 LSM8O95777 96 aaKnown RBP16.09■□□□□ 0.17
SMPD4-220ENST00000491319 F9P00740 461 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 ARRB1P49407 418 aaPredicted RBP16.09■□□□□ 0.17
SMPD4-220ENST00000491319 BNIP3Q12983 259 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 SMAD1Q15797 465 aaKnown RBP16.09■□□□□ 0.17
SMPD4-220ENST00000491319 NAA35Q5VZE5 725 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 LRRC31Q6UY01 552 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 BNIPLQ7Z465 357 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 FAM131BQ86XD5 332 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 EID2Q8N6I1 236 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 MFSD2AQ8NA29 543 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 OR7D4Q8NG98 312 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 OR2A12Q8NGT7 310 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 SLC20A1Q8WUM9 679 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 ARRDC3Q96B67 414 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 CNDP2Q96KP4 475 aaKnown RBP16.09■□□□□ 0.17
SMPD4-220ENST00000491319 MYOCQ99972 504 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 TMEM59LQ9UK28 342 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 DMTF1Q9Y222 760 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 GPSM3Q9Y4H4 160 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 PAXBP1Q9Y5B6 917 aa16.09■□□□□ 0.17
SMPD4-220ENST00000491319 KPNA3O00505 521 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-220ENST00000491319 SRGAP2O75044 1071 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 LDOC1O95751 146 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-220ENST00000491319 HOXB3P14651 431 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-220ENST00000491319 PRLRP16471 622 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 EEF1GP26641 437 aaKnown RBP16.08■□□□□ 0.16
SMPD4-220ENST00000491319 OR1E1P30953 314 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 CHRNA3P32297 505 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 KLK7P49862 253 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 CLDN6P56747 220 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 CAMK2BQ13554 666 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 SETMARQ53H47 684 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-220ENST00000491319 RAB6CQ53S08 254 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 C6orf118Q5T5N4 469 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 SFMBT2Q5VUG0 894 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 C22orf39Q6P5X5 142 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 KANSL1Q7Z3B3 1105 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 EMC1Q8N766 993 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 CHST14Q8NCH0 376 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 MSANTD4Q8NCY6 345 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 GRIN3AQ8TCU5 1115 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 C1orf74Q96LT6 269 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 CCDC114Q96M63 670 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 STK33Q9BYT3 514 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 RAB6CQ9H0N0 254 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 GANQ9H2C0 597 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 TNKS2Q9H2K2 1166 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 ERVMER34-1Q9H9K5 563 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 PREBQ9HCU5 417 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 METTL5Q9NRN9 209 aaKnown RBP16.08■□□□□ 0.16
SMPD4-220ENST00000491319 ZNF212Q9UDV6 495 aa16.08■□□□□ 0.16
SMPD4-220ENST00000491319 NOCTQ9UK39 431 aaKnown RBP16.08■□□□□ 0.16
SMPD4-220ENST00000491319 FARP1Q9Y4F1 1045 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-220ENST00000491319 LAMA5O15230 3695 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 TRABD2BA6NFA1 517 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 RNGTTO60942 597 aaKnown RBP16.07■□□□□ 0.16
SMPD4-220ENST00000491319 GFPT2O94808 682 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 NUDT1P36639 197 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 RXRGP48443 463 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 ACADVLP49748 655 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 ATP11AP98196 1134 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 STAT4Q14765 748 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 C19orf48Q6RUI8 117 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 IQCHQ86VS3 1027 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 OXR1Q8N573 874 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 KLK6Q92876 244 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 FZD3Q9NPG1 666 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 RAXQ9Y2V3 346 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 PCDHGA1Q9Y5H4 931 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 LRRK1Q38SD2 2015 aa16.07■□□□□ 0.16
SMPD4-220ENST00000491319 A0A1W2PQU0 124 aa16.06■□□□□ 0.16
SMPD4-220ENST00000491319 PRAMEF26H0Y7S4 382 aa16.06■□□□□ 0.16
SMPD4-220ENST00000491319 SLC31A1O15431 190 aa16.06■□□□□ 0.16
SMPD4-220ENST00000491319 SDC3O75056 442 aa16.06■□□□□ 0.16
SMPD4-220ENST00000491319 ZNF821O75541 412 aaPredicted RBP16.06■□□□□ 0.16
SMPD4-220ENST00000491319 RFPL3O75679 317 aa16.06■□□□□ 0.16
SMPD4-220ENST00000491319 ENDOD1O94919 500 aa16.06■□□□□ 0.16
SMPD4-220ENST00000491319 PRNPP04156 253 aa16.06■□□□□ 0.16
SMPD4-220ENST00000491319 CLCN6P51797 869 aa16.06■□□□□ 0.16
SMPD4-220ENST00000491319 CYP4F3Q08477 520 aa16.06■□□□□ 0.16
SMPD4-220ENST00000491319 CDO1Q16878 200 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms