RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 H3BNX3 289 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 NCAM2O15394 837 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 BMP15O95972 392 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 IL1AP01583 271 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 IFIT1P09914 478 aaKnown RBP5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 XBP1P17861 261 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 SCP2P22307 547 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 HNF1BP35680 557 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 GJC1P36383 396 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 PGM1P36871 562 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 CLCNKBP51801 687 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 CHRNDQ07001 517 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 SRSF1Q07955 248 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 NAA25Q14CX7 972 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 PRTGQ2VWP7 1150 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 SH2D4BQ5SQS7 431 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 WDR5BQ86VZ2 330 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 CPOQ8IVL8 374 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 FAM217AQ8IXS0 508 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 LRRC57Q8N9N7 239 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 DNAAF1Q8NEP3 725 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 UBE2Q2Q8WVN8 375 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 HERVK_113Q902F9 699 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 SLC25A28Q96A46 364 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 MAELQ96JY0 434 aaKnown RBP5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 FRMD8Q9BZ67 464 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 MROH8Q9H579 483 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 PCDHA12Q9UN75 941 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 SQORQ9Y6N5 450 aa5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 SETD1BQ9UPS6 1966 aaKnown RBP5.27□□□□□ -1.57
HMGB1P38-201ENST00000490557 COL3A1P02461 1466 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 SH2D7A6NKC9 451 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 GUCY1B2O75343 617 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 DDAH2O95865 285 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 POLBP06746 335 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 LMO1P25800 156 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 MTNR1AP48039 350 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 KCNJ4P48050 445 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 TLE2Q04725 743 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 LAMB3Q13751 1172 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 PTGR1Q14914 329 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 GPR63Q9BZJ6 419 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 TAOK3Q9H2K8 898 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 IL21RQ9HBE5 538 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 ENTPD7Q9NQZ7 604 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 ZDHHC7Q9NXF8 308 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 SAGE1Q9NXZ1 904 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 TBC1D14Q9P2M4 693 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 ICKQ9UPZ9 632 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 OSGIN2Q9Y236 505 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 CNPY2Q9Y2B0 182 aa5.26□□□□□ -1.57
HMGB1P38-201ENST00000490557 A0A0G2JK05 382 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 LY6G6EA0A0G2JKS1 128 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 RNMTO43148 476 aaKnown RBP5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 PYGLP06737 847 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 PSG1P11464 419 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 TBXAS1P24557 533 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 YWHAQP27348 245 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 NR4A2P43354 598 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 TMPRSS3P57727 454 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 NFIL3Q16649 462 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 WDR45BQ5MNZ6 344 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 GJB7Q6PEY0 223 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 BBS12Q6ZW61 710 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 LRRC8DQ7L1W4 858 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 C1QL2Q7Z5L3 287 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 ADGRG6Q86SQ4 1221 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 PIP4P1Q86T03 277 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 HSPH1Q92598 858 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 CNOT9Q92600 299 aaKnown RBP5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 ZNF333Q96JL9 665 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 FBXO40Q9UH90 709 aa5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 CNOT7Q9UIV1 285 aaKnown RBP5.25□□□□□ -1.57
HMGB1P38-201ENST00000490557 TRBV5-7A0A0A0MS05 114 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 CCDC196A0A1B0GTZ2 297 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 CCDC189A1A4V9 331 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 C17orf102A2RUQ5 167 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 GAGE12JA6NER3 117 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 MYMKA6NI61 221 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 MDM4O15151 490 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 KLKB1P03952 638 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 RFC1P35251 1148 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 PSMC2P35998 433 aaKnown RBP5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 GPD2P43304 727 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 VAMP2P63027 116 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 PPATQ06203 517 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 RETSATQ6NUM9 610 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 HORMAD2Q8N7B1 307 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 RFWD2Q8NHY2 731 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 HDAC7Q8WUI4 952 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 B3GNT4Q9C0J1 378 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 GRHL1Q9NZI5 618 aa5.24□□□□□ -1.57
HMGB1P38-201ENST00000490557 TARSL2A2RTX5 802 aaKnown RBP5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 B4DGG1 531 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 H0YGN5 161 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 EPN2O95208 641 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 IFNA2P01563 188 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 CHRM4P08173 479 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 UNGP13051 313 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms