RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 RAD51BO15315 384 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 SPINT1O43278 529 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 BNIP3LO60238 219 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 RPLP0P05388 317 aaKnown RBP14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 CCKBRP32239 447 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 DCTP40126 519 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 TXLNAP40222 546 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 ADIGQ0VDE8 80 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 EIF2B5Q13144 721 aaKnown RBP14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 PDE1CQ14123 709 aaPredicted RBP14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 FGL2Q14314 439 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 DCAF6Q58WW2 860 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 MS4A13Q5J8X5 152 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 NUGGCQ68CJ6 796 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 KYAT3Q6YP21 454 aaKnown RBP14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 CCDC73Q6ZRK6 1079 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 Q6ZVU0 165 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 SV2AQ7L0J3 742 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 TICAM1Q8IUC6 712 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 C12orf56Q8IXR9 622 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 SRRM1Q8IYB3 904 aaKnown RBP14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 SDR16C5Q8N3Y7 309 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 CCDC74AQ96AQ1 378 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 CYP3A43Q9HB55 503 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 ABCC13Q9NSE7 274 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 HS3ST3A1Q9Y663 406 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 RNF103O00237 685 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 MCF2LO15068 1137 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 SEMA7AO75326 666 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 CTSLP07711 333 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 PDGFRAP16234 1089 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 GNLYP22749 145 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 NOS2P35228 1153 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 OXCT1P55809 520 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 TBX4P57082 545 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 SNRPFP62306 86 aaKnown RBP14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 TMEM259Q4ZIN3 620 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 PRRT3Q5FWE3 981 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 FAM26FQ5R3K3 315 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 MSANTD2Q6P1R3 559 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 FAM174AQ8TBP5 190 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 TATDN2Q93075 761 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 AZIN2Q96A70 460 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 TMEM74Q96NL1 305 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 IPO9Q96P70 1041 aaKnown RBP14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 CPEB1Q9BZB8 566 aaKnown RBP14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 LRRC4Q9HBW1 653 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 TFIP11Q9UBB9 837 aaKnown RBP14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 SPASTQ9UBP0 616 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 GULP1Q9UBP9 304 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 PNMA8BQ9ULN7 279 aaPredicted RBP14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 CLIC4Q9Y696 253 aa14.05□□□□□ -0.16
EXOSC3-207ENST00000490516 OTOGQ6ZRI0 2925 aa14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 KPNA3O00505 521 aaPredicted RBP14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 ALOX15BO15296 676 aa14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 YY2O15391 372 aa14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 PAK4O96013 591 aaPredicted RBP14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 ANXA6P08133 673 aa14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 DLG2Q15700 870 aa14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 CAPRIN2Q6IMN6 1127 aaKnown RBP14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 ESRP1Q6NXG1 681 aaKnown RBP14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 LGI2Q8N0V4 545 aa14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 PDILTQ8N807 584 aa14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 ANKRD52Q8NB46 1076 aa14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 SLC4A11Q8NBS3 891 aa14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 ABHD17AQ96GS6 310 aa14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 DDX50Q9BQ39 737 aaKnown RBP14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 LRRC61Q9BV99 259 aa14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 SLC17A9Q9BYT1 436 aa14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 CLPBQ9H078 707 aa14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 SIRPGQ9P1W8 387 aa14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 APOBEC3BQ9UH17 382 aaKnown RBP14.04□□□□□ -0.16
EXOSC3-207ENST00000490516 RP1L1Q8IWN7 2480 aaPredicted RBP14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 LMO7DNF2Z398 122 aa14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 ATP9BO43861 1147 aa14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 MOCS2O96007 188 aaPredicted RBP14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 CELA2BP08218 269 aaPredicted RBP14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 LIFP15018 202 aa14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 RABIFP47224 123 aa14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 SLC8A3P57103 927 aa14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 SULT2A1Q06520 285 aa14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 KLRB1Q12918 225 aa14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 GOLGA7BQ2TAP0 167 aa14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 C1orf220Q5T0J3 134 aa14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 KYQ8NBH2 561 aa14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 BTN2A2Q8WVV5 523 aa14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 NKD1Q969G9 470 aa14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 FCRL2Q96LA5 508 aaPredicted RBP14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 NIF3L1Q9GZT8 377 aa14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 LRRN3Q9H3W5 708 aa14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 XPO7Q9UIA9 1087 aaKnown RBP14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 DAAM1Q9Y4D1 1078 aa14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 SRPRBQ9Y5M8 271 aaKnown RBP14.03□□□□□ -0.16
EXOSC3-207ENST00000490516 SETD2Q9BYW2 2564 aaPredicted RBP14.02□□□□□ -0.16
EXOSC3-207ENST00000490516 PRR19A6NJB7 356 aa14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 XPO1O14980 1071 aaKnown RBP14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 PRKCGP05129 697 aa14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 TSHRP16473 764 aa14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 NR1D1P20393 614 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms