RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 MAP3K7O43318 606 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 LMNAP02545 664 aaKnown RBP15.99■□□□□ 0.15
BRD9-208ENST00000489816 AHSGP02765 367 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 GABRB3P28472 473 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 SERPINB6P35237 376 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 THPOP40225 353 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 KLC1Q07866 573 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 ITKQ08881 620 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 RPAINQ86UA6 219 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 ZSCAN18Q8TBC5 510 aaPredicted RBP15.99■□□□□ 0.15
BRD9-208ENST00000489816 KCTD13Q8WZ19 329 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 FICDQ9BVA6 458 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 FAM124BQ9H5Z6 455 aaPredicted RBP15.99■□□□□ 0.15
BRD9-208ENST00000489816 MKS1Q9NXB0 559 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 TLK1Q9UKI8 766 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 SCNN1AP37088 669 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 CXCR3P49682 368 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 HUNKP57058 714 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 C2orf69Q8N8R5 385 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 OR10T2Q8NGX3 314 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 LENG8Q96PV6 779 aaPredicted RBP15.99■□□□□ 0.15
BRD9-208ENST00000489816 RTP3Q9BQQ7 232 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 GBA3Q9H227 469 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 CNGB3Q9NQW8 809 aa15.99■□□□□ 0.15
BRD9-208ENST00000489816 MTF2Q9Y483 593 aaPredicted RBP15.99■□□□□ 0.15
BRD9-208ENST00000489816 BUD23O43709 281 aaKnown RBP15.98■□□□□ 0.15
BRD9-208ENST00000489816 MGEA5O60502 916 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 LINGO3P0C6S8 592 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 TSPAN8P19075 237 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 TCN1P20061 433 aaPredicted RBP15.98■□□□□ 0.15
BRD9-208ENST00000489816 SERPINB8P50452 374 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 SEMA3BQ13214 749 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 ACMSDQ8TDX5 336 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 GTF3C2Q8WUA4 911 aaPredicted RBP15.98■□□□□ 0.15
BRD9-208ENST00000489816 TEKT5Q96M29 485 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 NAT9Q9BTE0 207 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 ACE2Q9BYF1 805 aaPredicted RBP15.98■□□□□ 0.15
BRD9-208ENST00000489816 DNAI2Q9GZS0 605 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 CHST12Q9NRB3 414 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 C9IYK1 514 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 HHLA1C9JL84 531 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 ZNF195O14628 629 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 PIGNO95427 931 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 IL1BP01584 269 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 LRPAP1P30533 357 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 GRIK1P39086 918 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 GJA9P57773 515 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 ARL13AQ5H913 290 aaPredicted RBP15.98■□□□□ 0.15
BRD9-208ENST00000489816 BHLHA9Q7RTU4 235 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 PHC3Q8NDX5 983 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 BRD8Q9H0E9 1235 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 CASS4Q9NQ75 786 aa15.98■□□□□ 0.15
BRD9-208ENST00000489816 EIF2B3Q9NR50 452 aaKnown RBP15.98■□□□□ 0.15
BRD9-208ENST00000489816 GRIA4P48058 902 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 MRPS6P82932 125 aaKnown RBP15.97■□□□□ 0.15
BRD9-208ENST00000489816 LIMS2Q7Z4I7 341 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 CEP97Q8IW35 865 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 USP13Q92995 863 aaPredicted RBP15.97■□□□□ 0.15
BRD9-208ENST00000489816 NXNL1Q96CM4 212 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 SMARCD1Q96GM5 515 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 CATSPER2Q96P56 530 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 KLHL5Q96PQ7 755 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 BATF3Q9NR55 127 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 NDE1Q9NXR1 346 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 HAS3O00219 553 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 MAGEC1O60732 1142 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 HNRNPLP14866 589 aaKnown RBP eCLIP15.97■□□□□ 0.15
BRD9-208ENST00000489816 LHX1P48742 406 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 PKNOX1P55347 436 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 ACTR3P61158 418 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 TRIM32Q13049 653 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 KCTD11Q693B1 232 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 RNF111Q6ZNA4 994 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 SLC39A8Q9C0K1 460 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 SUDS3Q9H7L9 328 aaPredicted RBP15.97■□□□□ 0.15
BRD9-208ENST00000489816 PIDD1Q9HB75 910 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 STX16-NPEPL1H3BU86 382 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 TNPO2O14787 897 aaKnown RBP15.97■□□□□ 0.15
BRD9-208ENST00000489816 TRIM13O60858 407 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 PAGE1O75459 146 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 LUC7L3O95232 432 aaKnown RBP15.97■□□□□ 0.15
BRD9-208ENST00000489816 GPR15P49685 360 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 CCNHP51946 323 aaPredicted RBP15.97■□□□□ 0.15
BRD9-208ENST00000489816 RAP1GDS1P52306 607 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 ASPHQ12797 758 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 DNAL1Q4LDG9 190 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 ZNF789Q5FWF6 425 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 BNIPLQ7Z465 357 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 C14orf80Q86SX3 495 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 CCNJLQ8IV13 435 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 CASP10Q92851 521 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 RBM22Q9NW64 420 aaKnown RBP eCLIP15.97■□□□□ 0.151e-14■■■■■ 31.6
BRD9-208ENST00000489816 ABI2Q9NYB9 513 aaPredicted RBP15.97■□□□□ 0.15
BRD9-208ENST00000489816 ZDHHC2Q9UIJ5 367 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 AK5Q9Y6K8 562 aa15.97■□□□□ 0.15
BRD9-208ENST00000489816 SOAT2O75908 522 aa15.96■□□□□ 0.15
BRD9-208ENST00000489816 TOMM70O94826 608 aa15.96■□□□□ 0.15
BRD9-208ENST00000489816 HMBSP08397 361 aa15.96■□□□□ 0.15
BRD9-208ENST00000489816 SKIP12755 728 aa15.96■□□□□ 0.15
BRD9-208ENST00000489816 AOC1P19801 751 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms