RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 MAPKAPK2P49137 400 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 MAMLD1Q13495 774 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 PPP1R15BQ5SWA1 713 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 ARTNQ5T4W7 220 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 FAM72AQ5TYM5 149 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 FAM72DQ6L9T8 149 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 ADAT2Q7Z6V5 191 aaKnown RBP18.24■□□□□ 0.51
ABCF3-217ENST00000489719 FAM72BQ86X60 149 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 SKA1Q96BD8 255 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 MAGEB5Q9BZ81 275 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 GAREM1Q9H706 876 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 TM9SF3Q9HD45 589 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 ZNF212Q9UDV6 495 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 DNAI1Q9UI46 699 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 SARDHQ9UL12 918 aa18.24■□□□□ 0.51
ABCF3-217ENST00000489719 TPX2Q9ULW0 747 aaKnown RBP18.24■□□□□ 0.51
ABCF3-217ENST00000489719 CKAP5Q14008 2032 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 NUP205Q92621 2012 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 A0A1W2PPC4 97 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 SLC7A4O43246 635 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 SMAD6O43541 496 aaKnown RBP18.23■□□□□ 0.51
ABCF3-217ENST00000489719 RTN2O75298 545 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 CER1O95813 267 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 IGHV4-34P06331 123 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 GLDCP23378 1020 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 CHRNA3P32297 505 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 DNA2P51530 1060 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 CCR5P51681 352 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 AIF1P55008 147 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 SCAPQ12770 1279 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 POM121L1PQ3SYA9 428 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 MANEALQ5VSG8 457 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 TMIEQ8NEW7 156 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 OR2A12Q8NGT7 310 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 CPLX3Q8WVH0 158 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 TTYH3Q9C0H2 523 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 MAGEH1Q9H213 219 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 KDM4CQ9H3R0 1056 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 DYRK4Q9NR20 520 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 TMEM248Q9NWD8 314 aa18.23■□□□□ 0.51
ABCF3-217ENST00000489719 BZW2Q9Y6E2 419 aaKnown RBP18.23■□□□□ 0.51
ABCF3-217ENST00000489719 DDX3XO00571 662 aaKnown RBP eCLIP18.22■□□□□ 0.51
ABCF3-217ENST00000489719 RAMP2O60895 175 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 ZMPSTE24O75844 475 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 PRNPP04156 253 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 PSMA2P25787 234 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 EPHB2P29323 1055 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 DRD3P35462 400 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 ACVRL1P37023 503 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 ADPRHP54922 357 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 GEMIN4P57678 1058 aaKnown RBP18.22■□□□□ 0.51
ABCF3-217ENST00000489719 RACK1P63244 317 aaKnown RBP18.22■□□□□ 0.51
ABCF3-217ENST00000489719 CNTN1Q12860 1018 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 POLD3Q15054 466 aaPredicted RBP18.22■□□□□ 0.51
ABCF3-217ENST00000489719 HLA-BQ31612 363 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 PLEKHA7Q6IQ23 1121 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 TMC6Q7Z403 805 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 PIP4P1Q86T03 277 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 PRPF39Q86UA1 669 aaKnown RBP18.22■□□□□ 0.51
ABCF3-217ENST00000489719 VPS36Q86VN1 386 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 NLRP14Q86W24 1093 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 ZNF354CQ86Y25 554 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 IQCDQ96DY2 449 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 EPAS1Q99814 870 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.22■□□□□ 0.51
ABCF3-217ENST00000489719 ACE2Q9BYF1 805 aaPredicted RBP18.22■□□□□ 0.51
ABCF3-217ENST00000489719 CEP44Q9C0F1 390 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 TNKS2Q9H2K2 1166 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 FZD10Q9ULW2 581 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 ANKRD6Q9Y2G4 727 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 PCDHB9Q9Y5E1 797 aa18.22■□□□□ 0.51
ABCF3-217ENST00000489719 A0A1W2PQJ5 194 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 PLK4O00444 970 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 KPNA3O00505 521 aaPredicted RBP18.21■□□□□ 0.51
ABCF3-217ENST00000489719 CREB3O43889 395 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 RNF8O76064 485 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 TPM3P06753 285 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 CD59P13987 128 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 GRIA4P48058 902 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 SERPINH1P50454 418 aaKnown RBP18.21■□□□□ 0.51
ABCF3-217ENST00000489719 METAP1P53582 386 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 C21orf59P57076 290 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 HNRNPDQ14103 355 aaKnown RBP18.21■□□□□ 0.51
ABCF3-217ENST00000489719 KIF19Q2TAC6 998 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 ARSIQ5FYB1 569 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 C22orf39Q6P5X5 142 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 PYROXD2Q8N2H3 581 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 PCDH20Q8N6Y1 951 aaKnown RBP18.21■□□□□ 0.51
ABCF3-217ENST00000489719 SYN2Q92777 582 aaPredicted RBP18.21■□□□□ 0.51
ABCF3-217ENST00000489719 ARHGEF2Q92974 986 aaKnown RBP18.21■□□□□ 0.51
ABCF3-217ENST00000489719 TRIM11Q96F44 468 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 CATSPERBQ9H7T0 1116 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 AASDHPPTQ9NRN7 309 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 NDFIP2Q9NV92 336 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 DONSONQ9NYP3 566 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 IFNKQ9P0W0 207 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 CNOT8Q9UFF9 292 aaKnown RBP18.21■□□□□ 0.51
ABCF3-217ENST00000489719 IL36AQ9UHA7 158 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 SLCO1B1Q9Y6L6 691 aa18.21■□□□□ 0.51
ABCF3-217ENST00000489719 LAMA1P25391 3075 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms