RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 KCNH6Q9H252 994 aa14.72□□□□□ -0.05
HLA-F-229ENST00000489502 TNKS2Q9H2K2 1166 aa14.72□□□□□ -0.05
HLA-F-229ENST00000489502 LZTFL1Q9NQ48 299 aa14.72□□□□□ -0.05
HLA-F-229ENST00000489502 PRSS16Q9NQE7 514 aa14.72□□□□□ -0.05
HLA-F-229ENST00000489502 ZSCAN32Q9NX65 697 aa14.72□□□□□ -0.05
HLA-F-229ENST00000489502 GUCA1BQ9UMX6 200 aa14.72□□□□□ -0.05
HLA-F-229ENST00000489502 INVSQ9Y283 1065 aa14.72□□□□□ -0.05
HLA-F-229ENST00000489502 PPP2R2CQ9Y2T4 447 aa14.72□□□□□ -0.05
HLA-F-229ENST00000489502 FCF1Q9Y324 198 aaKnown RBP14.72□□□□□ -0.05
HLA-F-229ENST00000489502 ARHGAP42A6NI28 874 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 ATP9BO43861 1147 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 CD160O95971 181 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 HOXA6P31267 233 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 CTNNA1P35221 906 aaKnown RBP14.71□□□□□ -0.05
HLA-F-229ENST00000489502 NNMTP40261 264 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 PAPOLAP51003 745 aaKnown RBP14.71□□□□□ -0.05
HLA-F-229ENST00000489502 SERINC3Q13530 473 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 LLGL1Q15334 1064 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 DLG2Q15700 870 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 IFI16Q16666 785 aaKnown RBP14.71□□□□□ -0.05
HLA-F-229ENST00000489502 ODF2Q5BJF6 829 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 RETSATQ6NUM9 610 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 MFSD7Q6UXD7 560 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 WDR5BQ86VZ2 330 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 MAP7D3Q8IWC1 876 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 STK40Q8N2I9 435 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 PQLC3Q8N755 202 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 OR2T3Q8NH03 318 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 KIAA1524Q8TCG1 905 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 MRGPRX1Q96LB2 322 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 DDX56Q9NY93 547 aaKnown RBP14.71□□□□□ -0.05
HLA-F-229ENST00000489502 DONSONQ9NYP3 566 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 HPCAL4Q9UM19 191 aa14.71□□□□□ -0.05
HLA-F-229ENST00000489502 PACSIN2Q9UNF0 486 aaPredicted RBP14.71□□□□□ -0.05
HLA-F-229ENST00000489502 SPAG17Q6Q759 2223 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 PLXND1Q9Y4D7 1925 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 J3KR12 359 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 KDELR3O43731 214 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 KRT86O43790 486 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 TMCC1O94876 653 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 SERPINB6P35237 376 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 PSMD8P48556 350 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 DNA2P51530 1060 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 DYNLT1P63172 113 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 C9orf64Q5T6V5 341 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 CCDC50Q8IVM0 306 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 KATNAL2Q8IYT4 538 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 FAM160A2Q8N612 972 aaPredicted RBP14.7□□□□□ -0.06
HLA-F-229ENST00000489502 ZBTB44Q8NCP5 570 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 RLN3Q8WXF3 142 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 PTPRN2Q92932 1015 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 CALR3Q96L12 384 aaKnown RBP14.7□□□□□ -0.06
HLA-F-229ENST00000489502 FAM126AQ9BYI3 521 aaPredicted RBP14.7□□□□□ -0.06
HLA-F-229ENST00000489502 TM6SF2Q9BZW4 377 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 SP110Q9HB58 689 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 PDFQ9HBH1 243 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 EBF1Q9UH73 591 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 SUN2Q9UH99 717 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 PCDHGA2Q9Y5H1 932 aa14.7□□□□□ -0.06
HLA-F-229ENST00000489502 NUMA1Q14980 2115 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 SDK1Q7Z5N4 2213 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 ZBTB24O43167 697 aaPredicted RBP14.69□□□□□ -0.06
HLA-F-229ENST00000489502 PRAMEF11O60813 436 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 CTNNA2P26232 953 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 CDKN2BP42772 138 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 VASPP50552 380 aaPredicted RBP14.69□□□□□ -0.06
HLA-F-229ENST00000489502 CLCN6P51797 869 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 NRLP54845 237 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 RPS14P62263 151 aaKnown RBP14.69□□□□□ -0.06
HLA-F-229ENST00000489502 GBE1Q04446 702 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 CCDC173Q0VFZ6 552 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 ZNF776Q68DI1 518 aaPredicted RBP14.69□□□□□ -0.06
HLA-F-229ENST00000489502 SPOCD1Q6ZMY3 1216 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 PEX26Q7Z412 305 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 NT5DC3Q86UY8 548 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 RFX6Q8HWS3 928 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 TMPRSS6Q8IU80 811 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 MMAAQ8IVH4 418 aaKnown RBP14.69□□□□□ -0.06
HLA-F-229ENST00000489502 ATPAF2Q8N5M1 289 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 LZTR1Q8N653 840 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.69□□□□□ -0.06
HLA-F-229ENST00000489502 ALG3Q92685 438 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 SIPA1Q96FS4 1042 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 RNF157Q96PX1 679 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 PRDM16Q9HAZ2 1276 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 UBA2Q9UBT2 640 aaPredicted RBP14.69□□□□□ -0.06
HLA-F-229ENST00000489502 CYP8B1Q9UNU6 501 aa14.69□□□□□ -0.06
HLA-F-229ENST00000489502 CCDC163A0A0D9SF12 145 aa14.68□□□□□ -0.06
HLA-F-229ENST00000489502 TARSL2A2RTX5 802 aaKnown RBP14.68□□□□□ -0.06
HLA-F-229ENST00000489502 ZSCAN5CA6NGD5 496 aaPredicted RBP14.68□□□□□ -0.06
HLA-F-229ENST00000489502 LILRB5O75023 590 aa14.68□□□□□ -0.06
HLA-F-229ENST00000489502 ZNF821O75541 412 aaPredicted RBP14.68□□□□□ -0.06
HLA-F-229ENST00000489502 RPP40O75818 363 aaKnown RBP14.68□□□□□ -0.06
HLA-F-229ENST00000489502 KRT10P13645 584 aa14.68□□□□□ -0.06
HLA-F-229ENST00000489502 BCKDHBP21953 392 aa14.68□□□□□ -0.06
HLA-F-229ENST00000489502 GEMIN4P57678 1058 aaKnown RBP14.68□□□□□ -0.06
HLA-F-229ENST00000489502 NHLH1Q02575 133 aa14.68□□□□□ -0.06
HLA-F-229ENST00000489502 ELAVL3Q14576 367 aaKnown RBP14.68□□□□□ -0.06
HLA-F-229ENST00000489502 PAFAH1B3Q15102 231 aaKnown RBP14.68□□□□□ -0.06
HLA-F-229ENST00000489502 POM121L1PQ3SYA9 428 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms