RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 PIAS4Q8N2W9 510 aaPredicted RBP21.29■■□□□ 1
SND1-214ENST00000489417 TEX26Q8N6G2 289 aa21.29■■□□□ 1
SND1-214ENST00000489417 FIBINQ8TAL6 211 aa21.29■■□□□ 1
SND1-214ENST00000489417 OSCP1Q8WVF1 389 aa21.29■■□□□ 1
SND1-214ENST00000489417 BBS2Q9BXC9 721 aa21.29■■□□□ 1
SND1-214ENST00000489417 SHROOM3Q8TF72 1996 aa21.29■■□□□ 1
SND1-214ENST00000489417 NEDD8-MDP1E9PL57 170 aa21.29■■□□□ 1
SND1-214ENST00000489417 HLA-DQB2P05538 268 aa21.29■■□□□ 1
SND1-214ENST00000489417 APRTP07741 180 aa21.29■■□□□ 1
SND1-214ENST00000489417 HSPA9P38646 679 aaKnown RBP21.29■■□□□ 1
SND1-214ENST00000489417 DHX9Q08211 1270 aaKnown RBP21.29■■□□□ 1
SND1-214ENST00000489417 LY6G5CQ5SRR4 150 aa21.29■■□□□ 1
SND1-214ENST00000489417 CEP128Q6ZU80 1094 aa21.29■■□□□ 1
SND1-214ENST00000489417 CCDC25Q86WR0 208 aa21.29■■□□□ 1
SND1-214ENST00000489417 ADGRG2Q8IZP9 1017 aa21.29■■□□□ 1
SND1-214ENST00000489417 MREGQ8N565 214 aa21.29■■□□□ 1
SND1-214ENST00000489417 ZNF419Q96HQ0 510 aaPredicted RBP21.29■■□□□ 1
SND1-214ENST00000489417 PWWP2AQ96N64 755 aa21.29■■□□□ 1
SND1-214ENST00000489417 FEM1AQ9BSK4 669 aa21.29■■□□□ 1
SND1-214ENST00000489417 GLOD4Q9HC38 313 aa21.29■■□□□ 1
SND1-214ENST00000489417 ZFP14Q9HCL3 533 aa21.29■■□□□ 1
SND1-214ENST00000489417 MARK1Q9P0L2 795 aa21.29■■□□□ 1
SND1-214ENST00000489417 KIAA1522Q9P206 1035 aaPredicted RBP21.29■■□□□ 1
SND1-214ENST00000489417 CLEC4EQ9ULY5 219 aa21.29■■□□□ 1
SND1-214ENST00000489417 OR51B4Q9Y5P0 310 aa21.29■■□□□ 1
SND1-214ENST00000489417 LAMA3Q16787 3333 aa21.29■■□□□ 1
SND1-214ENST00000489417 CHD5Q8TDI0 1954 aa21.28■■□□□ 1
SND1-214ENST00000489417 MYO9BQ13459 2157 aa21.28■■□□□ 1
SND1-214ENST00000489417 PRRC2BQ5JSZ5 2229 aaKnown RBP21.28■■□□□ 1
SND1-214ENST00000489417 GOLGA8MH3BSY2 632 aa21.28■■□□□ 1
SND1-214ENST00000489417 PPFIA2O75334 1257 aa21.28■■□□□ 1
SND1-214ENST00000489417 GLDCP23378 1020 aa21.28■■□□□ 1
SND1-214ENST00000489417 GBP2P32456 591 aaPredicted RBP21.28■■□□□ 1
SND1-214ENST00000489417 MMP13P45452 471 aa21.28■■□□□ 1
SND1-214ENST00000489417 LMAN1P49257 510 aa21.28■■□□□ 1
SND1-214ENST00000489417 NUMBP49757 651 aa21.28■■□□□ 1
SND1-214ENST00000489417 TNK2Q07912 1038 aa21.28■■□□□ 1
SND1-214ENST00000489417 SLC10A7Q0GE19 358 aa21.28■■□□□ 1
SND1-214ENST00000489417 LMAN2Q12907 356 aa21.28■■□□□ 1
SND1-214ENST00000489417 LBRQ14739 615 aaKnown RBP21.28■■□□□ 1
SND1-214ENST00000489417 SYCP2LQ5T4T6 812 aa21.28■■□□□ 1
SND1-214ENST00000489417 PRPF38BQ5VTL8 546 aaKnown RBP21.28■■□□□ 1
SND1-214ENST00000489417 PPP1R21Q6ZMI0 780 aa21.28■■□□□ 1
SND1-214ENST00000489417 LEKR1Q6ZMV7 388 aa21.28■■□□□ 1
SND1-214ENST00000489417 E2F7Q96AV8 911 aa21.28■■□□□ 1
SND1-214ENST00000489417 ALG14Q96F25 216 aa21.28■■□□□ 1
SND1-214ENST00000489417 NECTIN4Q96NY8 510 aa21.28■■□□□ 1
SND1-214ENST00000489417 TXLNGYQ9BZA5 131 aa21.28■■□□□ 1
SND1-214ENST00000489417 POMKQ9H5K3 350 aa21.28■■□□□ 1
SND1-214ENST00000489417 EIF2B3Q9NR50 452 aaKnown RBP21.28■■□□□ 1
SND1-214ENST00000489417 ZNF446Q9NWS9 450 aa21.28■■□□□ 1
SND1-214ENST00000489417 UBA2Q9UBT2 640 aaPredicted RBP21.28■■□□□ 1
SND1-214ENST00000489417 VPS28Q9UK41 221 aa21.28■■□□□ 1
SND1-214ENST00000489417 ATP8A1Q9Y2Q0 1164 aa21.28■■□□□ 1
SND1-214ENST00000489417 CBX4O00257 560 aa21.27■■□□□ 1
SND1-214ENST00000489417 CACNG3O60359 315 aa21.27■■□□□ 1
SND1-214ENST00000489417 TYRP14679 529 aa21.27■■□□□ 1
SND1-214ENST00000489417 ARL4CP56559 192 aa21.27■■□□□ 1
SND1-214ENST00000489417 GAD2Q05329 585 aa21.27■■□□□ 1
SND1-214ENST00000489417 PRPSAP1Q14558 356 aa21.27■■□□□ 1
SND1-214ENST00000489417 SLMAPQ14BN4 828 aa21.27■■□□□ 1
SND1-214ENST00000489417 EML3Q32P44 896 aa21.27■■□□□ 1
SND1-214ENST00000489417 TANGO2Q6ICL3 276 aa21.27■■□□□ 1
SND1-214ENST00000489417 OTOP3Q7RTS5 596 aa21.27■■□□□ 1
SND1-214ENST00000489417 HDXQ7Z353 690 aa21.27■■□□□ 1
SND1-214ENST00000489417 ZNF557Q8N988 423 aaPredicted RBP21.27■■□□□ 1
SND1-214ENST00000489417 DCAF4L2Q8NA75 395 aa21.27■■□□□ 1
SND1-214ENST00000489417 SMRP1Q8NCR6 262 aa21.27■■□□□ 1
SND1-214ENST00000489417 MCUQ8NE86 351 aa21.27■■□□□ 1
SND1-214ENST00000489417 FCRL5Q96RD9 977 aa21.27■■□□□ 1
SND1-214ENST00000489417 GORASP1Q9BQQ3 440 aa21.27■■□□□ 1
SND1-214ENST00000489417 FRMD8Q9BZ67 464 aaPredicted RBP21.27■■□□□ 1
SND1-214ENST00000489417 NT5MQ9NPB1 228 aa21.27■■□□□ 1
SND1-214ENST00000489417 DNAJC17Q9NVM6 304 aaKnown RBP21.27■■□□□ 1
SND1-214ENST00000489417 THG1LQ9NWX6 298 aaKnown RBP21.27■■□□□ 1
SND1-214ENST00000489417 CD207Q9UJ71 328 aa21.27■■□□□ 1
SND1-214ENST00000489417 TTLL3Q9Y4R7 772 aa21.27■■□□□ 1
SND1-214ENST00000489417 ZMPSTE24O75844 475 aa21.26■□□□□ 0.99
SND1-214ENST00000489417 CYP17A1P05093 508 aa21.26■□□□□ 0.99
SND1-214ENST00000489417 CDK16Q00536 496 aa21.26■□□□□ 0.99
SND1-214ENST00000489417 SLC12A1Q13621 1099 aa21.26■□□□□ 0.99
SND1-214ENST00000489417 RFTN1Q14699 578 aaPredicted RBP21.26■□□□□ 0.99
SND1-214ENST00000489417 CASP8Q14790 479 aa21.26■□□□□ 0.99
SND1-214ENST00000489417 DHCR24Q15392 516 aa21.26■□□□□ 0.99
SND1-214ENST00000489417 HIF1AQ16665 826 aa21.26■□□□□ 0.99
SND1-214ENST00000489417 BBS5Q8N3I7 341 aa21.26■□□□□ 0.99
SND1-214ENST00000489417 PDCD7Q8N8D1 485 aaKnown RBP21.26■□□□□ 0.99
SND1-214ENST00000489417 TSEN2Q8NCE0 465 aaKnown RBP21.26■□□□□ 0.99
SND1-214ENST00000489417 ASIC4Q96FT7 647 aa21.26■□□□□ 0.99
SND1-214ENST00000489417 LMLNQ96KR4 655 aa21.26■□□□□ 0.99
SND1-214ENST00000489417 PPP1R2P1Q96PQ5 205 aa21.26■□□□□ 0.99
SND1-214ENST00000489417 PHACTR1Q9C0D0 580 aa21.26■□□□□ 0.99
SND1-214ENST00000489417 DENND4AQ7Z401 1863 aa21.26■□□□□ 0.99
SND1-214ENST00000489417 SNAP91O60641 907 aa21.25■□□□□ 0.99
SND1-214ENST00000489417 NFATC1O95644 943 aa21.25■□□□□ 0.99
SND1-214ENST00000489417 LAMP2P13473 410 aa21.25■□□□□ 0.99
SND1-214ENST00000489417 CD70P32970 193 aa21.25■□□□□ 0.99
SND1-214ENST00000489417 PLK1P53350 603 aa21.25■□□□□ 0.99
SND1-214ENST00000489417 ARF5P84085 180 aa21.25■□□□□ 0.99
SND1-214ENST00000489417 ZNF235Q14590 738 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms