RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 PIP5KL1Q5T9C9 394 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 SEL1L3Q68CR1 1132 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 KYAT3Q6YP21 454 aaKnown RBP15.48■□□□□ 0.07
UFD1-209ENST00000489406 UNC93AQ86WB7 457 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 PRR7Q8TB68 274 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 BTN2A2Q8WVV5 523 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 NDRG1Q92597 394 aaKnown RBP15.48■□□□□ 0.07
UFD1-209ENST00000489406 MYEOVQ96EZ4 313 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 TCTN2Q96GX1 697 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 TWNKQ96RR1 684 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 DUSP16Q9BY84 665 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 CDH19Q9H159 772 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 SIRPGQ9P1W8 387 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 APOBEC3BQ9UH17 382 aaKnown RBP15.48■□□□□ 0.07
UFD1-209ENST00000489406 PPM1HQ9ULR3 514 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 MED13LQ71F56 2210 aa15.48■□□□□ 0.07
UFD1-209ENST00000489406 ZNF18P17022 549 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 UGT1A3P35503 534 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 ARSDP51689 593 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 RPS24P62847 133 aaKnown RBP15.47■□□□□ 0.07
UFD1-209ENST00000489406 IRX6P78412 446 aaPredicted RBP15.47■□□□□ 0.07
UFD1-209ENST00000489406 CYP24A1Q07973 514 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 CDC20Q12834 499 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 EIF2B5Q13144 721 aaKnown RBP15.47■□□□□ 0.07
UFD1-209ENST00000489406 BIRC3Q13489 604 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 FAM133BQ5BKY9 247 aaKnown RBP15.47■□□□□ 0.07
UFD1-209ENST00000489406 PHF19Q5T6S3 580 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 ARL6IP4Q66PJ3 421 aaKnown RBP15.47■□□□□ 0.07
UFD1-209ENST00000489406 ASB18Q6ZVZ8 466 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 CCDC117Q8IWD4 279 aaPredicted RBP15.47■□□□□ 0.07
UFD1-209ENST00000489406 CACNA2D3Q8IZS8 1091 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 SLC34A3Q8N130 599 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 KYQ8NBH2 561 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 HJURPQ8NCD3 748 aaPredicted RBP15.47■□□□□ 0.07
UFD1-209ENST00000489406 DNAJC19Q96DA6 116 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 SLC45A3Q96JT2 553 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 PRICKLE1Q96MT3 831 aaPredicted RBP15.47■□□□□ 0.07
UFD1-209ENST00000489406 OLFML3Q9NRN5 406 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 OLA1Q9NTK5 396 aaKnown RBP15.47■□□□□ 0.07
UFD1-209ENST00000489406 GGT7Q9UJ14 662 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 ERRFI1Q9UJM3 462 aaPredicted RBP15.47■□□□□ 0.07
UFD1-209ENST00000489406 AKAP9Q99996 3911 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 CSMD2Q7Z408 3487 aa15.47■□□□□ 0.07
UFD1-209ENST00000489406 UNC13CQ8NB66 2214 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 ARHGAP10A1A4S6 786 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 RAD51BO15315 384 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 IRAK2O43187 625 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 CCL4P13236 92 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 TRIM21P19474 475 aaKnown RBP15.46■□□□□ 0.07
UFD1-209ENST00000489406 OAS2P29728 719 aaKnown RBP15.46■□□□□ 0.07
UFD1-209ENST00000489406 RABIFP47224 123 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 MRPL49Q13405 166 aaKnown RBP15.46■□□□□ 0.07
UFD1-209ENST00000489406 C16orf72Q14CZ0 275 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 ACCSLQ4AC99 568 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 CFAP52Q8N1V2 620 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 Q8N9G6 341 aaPredicted RBP15.46■□□□□ 0.07
UFD1-209ENST00000489406 RNF139Q8WU17 664 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 FRS2Q8WU20 508 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 EDEM1Q92611 657 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 PMEPA1Q969W9 287 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 LRRC61Q9BV99 259 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 IRX2Q9BZI1 471 aaPredicted RBP15.46■□□□□ 0.07
UFD1-209ENST00000489406 B3GNT4Q9C0J1 378 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 CLPBQ9H078 707 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 RNF215Q9Y6U7 377 aa15.46■□□□□ 0.07
UFD1-209ENST00000489406 ABCA2Q9BZC7 2435 aa15.45■□□□□ 0.06
UFD1-209ENST00000489406 TYW5A2RUC4 315 aaKnown RBP15.45■□□□□ 0.06
UFD1-209ENST00000489406 HNRNPRO43390 633 aaKnown RBP15.45■□□□□ 0.06
UFD1-209ENST00000489406 PAK4O96013 591 aaPredicted RBP15.45■□□□□ 0.06
UFD1-209ENST00000489406 IDEP14735 1019 aa15.45■□□□□ 0.06
UFD1-209ENST00000489406 NCOA4Q13772 614 aa15.45■□□□□ 0.06
UFD1-209ENST00000489406 TCTN3Q6NUS6 607 aa15.45■□□□□ 0.06
UFD1-209ENST00000489406 TIPARPQ7Z3E1 657 aaKnown RBP15.45■□□□□ 0.06
UFD1-209ENST00000489406 PHACTR4Q8IZ21 702 aa15.45■□□□□ 0.06
UFD1-209ENST00000489406 ARL10Q8N8L6 244 aa15.45■□□□□ 0.06
UFD1-209ENST00000489406 UNKQ9C0B0 810 aaKnown RBP15.45■□□□□ 0.06
UFD1-209ENST00000489406 CAPN5O15484 640 aaPredicted RBP15.44■□□□□ 0.06
UFD1-209ENST00000489406 BNIP3LO60238 219 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 ACSL4O60488 711 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 CELA2BP08218 269 aaPredicted RBP15.44■□□□□ 0.06
UFD1-209ENST00000489406 P4HA1P13674 534 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 TSHRP16473 764 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 SLC11A2P49281 568 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 CASP4P49662 377 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 TMEM259Q4ZIN3 620 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 RILPL1Q5EBL4 403 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 PPP1R26Q5T8A7 1209 aaPredicted RBP15.44■□□□□ 0.06
UFD1-209ENST00000489406 NADSYN1Q6IA69 706 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 CCNJLQ8IV13 435 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 CCDC13Q8IYE1 715 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 FAM184AQ8NB25 1140 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 SRRTQ9BXP5 876 aaKnown RBP15.44■□□□□ 0.06
UFD1-209ENST00000489406 SLC17A9Q9BYT1 436 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 SEMA6CQ9H3T2 930 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 ITGB1BP2Q9UKP3 347 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 PNMA8BQ9ULN7 279 aaPredicted RBP15.44■□□□□ 0.06
UFD1-209ENST00000489406 DOLKQ9UPQ8 538 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 MAP4K5Q9Y4K4 846 aa15.44■□□□□ 0.06
UFD1-209ENST00000489406 PRRC2CQ9Y520 2896 aaKnown RBP15.44■□□□□ 0.06
UFD1-209ENST00000489406 SPG11Q96JI7 2443 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms