RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 FBXO44Q9H4M3 255 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 PRDM12Q9H4Q4 367 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 CATSPERBQ9H7T0 1116 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 C10orf88Q9H8K7 445 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 SLC28A3Q9HAS3 691 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 ATP13A2Q9NQ11 1180 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 TXLNGQ9NUQ3 528 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 MIOSQ9NXC5 875 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 ARHGEF38Q9NXL2 777 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 NSMCE4AQ9NXX6 385 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.65□□□□□ -1.02
VTI1A-207ENST00000489357 ADAM28Q9UKQ2 775 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 PCDHGA11Q9Y5H2 935 aa8.65□□□□□ -1.02
VTI1A-207ENST00000489357 CDH23Q9H251 3354 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 CASTOR2A6NHX0 329 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 COPEO14579 308 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 LCE2BO14633 110 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 IRAK2O43187 625 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 CREB3O43889 395 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 CACNG3O60359 315 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 SPAG7O75391 227 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 BANF1O75531 89 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 EFEMP2O95967 443 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 SRGAP2BP0DMP2 458 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 BMP2P12643 396 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 CCNB1P14635 433 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 FOSL2P15408 326 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 VAV1P15498 845 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 CCNCP24863 283 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 CCR1P32246 355 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 FOXN2P32314 431 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 CRHR1P34998 444 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 GARSP41250 739 aaKnown RBP8.64□□□□□ -1.03
VTI1A-207ENST00000489357 MAGEA11P43364 429 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 NPY2RP49146 381 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 NDUFV1P49821 464 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 ATXN1P54253 815 aaKnown RBP8.64□□□□□ -1.03
VTI1A-207ENST00000489357 AP1B1Q10567 949 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 WASHC5Q12768 1159 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 PRPSAP1Q14558 356 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 SLC1A5Q15758 541 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 ATG16L1Q676U5 607 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 NAPEPLDQ6IQ20 393 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 TIGD7Q6NT04 549 aaPredicted RBP8.64□□□□□ -1.03
VTI1A-207ENST00000489357 MSANTD2Q6P1R3 559 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 CAPN12Q6ZSI9 719 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 SPATA2LQ8IUW3 424 aaPredicted RBP8.64□□□□□ -1.03
VTI1A-207ENST00000489357 SUGP1Q8IWZ8 645 aaKnown RBP8.64□□□□□ -1.03
VTI1A-207ENST00000489357 CTAGE3PQ8IX95 158 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 C4orf33Q8N1A6 199 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 PYROXD2Q8N2H3 581 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 ZNF276Q8N554 614 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 PPM1NQ8N819 430 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 CCDC63Q8NA47 563 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 CCNYQ8ND76 341 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 INPP5DQ92835 1189 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 LPPQ93052 612 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 ISL2Q96A47 359 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 CFAP36Q96G28 342 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 C8orf48Q96LL4 319 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 C1orf74Q96LT6 269 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 C7orf26Q96N11 449 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 SERPINB11Q96P15 392 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 LRRC37BQ96QE4 947 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 YME1L1Q96TA2 773 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 TRIM55Q9BYV6 548 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 IL22Q9GZX6 179 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 FAM96AQ9H5X1 160 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 MANSC1Q9H8J5 431 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 ZNF395Q9H8N7 513 aaPredicted RBP8.64□□□□□ -1.03
VTI1A-207ENST00000489357 LRRC40Q9H9A6 602 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 SAR1AQ9NR31 198 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 OLA1Q9NTK5 396 aaKnown RBP8.64□□□□□ -1.03
VTI1A-207ENST00000489357 BFARQ9NZS9 450 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 LMCD1Q9NZU5 365 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 OR12D3Q9UGF7 316 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 GRID1Q9ULK0 1009 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 RPL26L1Q9UNX3 145 aaKnown RBP8.64□□□□□ -1.03
VTI1A-207ENST00000489357 AAR2Q9Y312 384 aaKnown RBP8.64□□□□□ -1.03
VTI1A-207ENST00000489357 RWDD3Q9Y3V2 267 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 MAD1L1Q9Y6D9 718 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 MRPL42Q9Y6G3 142 aaKnown RBP8.64□□□□□ -1.03
VTI1A-207ENST00000489357 COL6A3P12111 3177 aa8.64□□□□□ -1.03
VTI1A-207ENST00000489357 FAM237BA0A1B0GVD1 139 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 OR6C75A6NL08 312 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 TBKBP1A7MCY6 615 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 WASH4PA8MWX3 477 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 TRIM49D1C9J1S8 452 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 H3BNC9 293 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 TNFRSF10BO14763 440 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 B4GALT3O60512 393 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 GLRA3O75311 464 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 AVILO75366 819 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 ANXA9O76027 345 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 USP1O94782 785 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 USP17L7P0C7H9 530 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 ADRA1DP25100 572 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 EPHB2P29323 1055 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 POLD2P49005 469 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 MGAT5Q09328 741 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms