RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 OMA1Q96E52 524 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 CERS2Q96G23 380 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 LRRC19Q9H756 370 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 FYNP06241 537 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 CYP3A4P08684 503 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 COX7A2P14406 83 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 SREBF2Q12772 1141 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 MSLNQ13421 630 aaPredicted RBP17.85■□□□□ 0.45
NPHP4-209ENST00000489180 APOBEC3HQ6NTF7 200 aaKnown RBP17.85■□□□□ 0.45
NPHP4-209ENST00000489180 GATAD2AQ86YP4 633 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 TNS4Q8IZW8 715 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 LZTR1Q8N653 840 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 KCTD4Q8WVF5 259 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 WDR18Q9BV38 432 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 KLHL28Q9NXS3 571 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 MRPL39Q9NYK5 338 aaKnown RBP17.85■□□□□ 0.45
NPHP4-209ENST00000489180 BTRCQ9Y297 605 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 CASZ1Q86V15 1759 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 GPR15P49685 360 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 LSM3P62310 102 aaKnown RBP17.85■□□□□ 0.45
NPHP4-209ENST00000489180 RPL7AP62424 266 aaKnown RBP17.85■□□□□ 0.45
NPHP4-209ENST00000489180 RETSATQ6NUM9 610 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 PTGR2Q8N8N7 351 aaPredicted RBP17.85■□□□□ 0.45
NPHP4-209ENST00000489180 DLG3Q92796 817 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 FAM84AQ96KN4 292 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 PORCNQ9H237 461 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 PSMD10O75832 226 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 OR56A5P0C7T3 313 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 NFKB1P19838 968 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 TAS2R40P59535 323 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 TGFB2P61812 414 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 PRKCQQ04759 706 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 ZSWIM7Q19AV6 140 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 PCID2Q5JVF3 399 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 NEK10Q6ZWH5 1172 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 CACUL1Q86Y37 369 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 P2RX7Q99572 595 aaKnown RBP17.85■□□□□ 0.45
NPHP4-209ENST00000489180 CLIC5Q9NZA1 410 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 UBA2Q9UBT2 640 aaPredicted RBP17.85■□□□□ 0.45
NPHP4-209ENST00000489180 PRKAG3Q9UGI9 489 aa17.85■□□□□ 0.45
NPHP4-209ENST00000489180 REXO2Q9Y3B8 237 aaKnown RBP17.85■□□□□ 0.45
NPHP4-209ENST00000489180 LBPP18428 481 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 ZNF143P52747 638 aaPredicted RBP17.84■□□□□ 0.45
NPHP4-209ENST00000489180 CRY1Q16526 586 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 PHKG1Q16816 387 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 SCIMPQ6UWF3 145 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 RD3Q7Z3Z2 195 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 DHDDSQ86SQ9 333 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 ZBTB46Q86UZ6 589 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 MCOLN3Q8TDD5 553 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 IL22Q9GZX6 179 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 ARL15Q9NXU5 204 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 COG5Q9UP83 839 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 TSPAN19P0C672 248 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 ZNF37AP17032 561 aaPredicted RBP17.84■□□□□ 0.45
NPHP4-209ENST00000489180 ACOX1Q15067 660 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 SPANXN2Q5MJ10 180 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 DDI2Q5TDH0 399 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 DOK6Q6PKX4 331 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 UTS2BQ765I0 119 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 CDK20Q8IZL9 346 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 TSPAN14Q8NG11 270 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 YME1L1Q96TA2 773 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 RNF225M0QZC1 329 aaPredicted RBP17.84■□□□□ 0.45
NPHP4-209ENST00000489180 RNASEH1O60930 286 aaKnown RBP17.84■□□□□ 0.45
NPHP4-209ENST00000489180 RECQL4O94761 1208 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 PSME3P61289 254 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 GRIK5Q16478 980 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 ZNF618Q5T7W0 954 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 NFKBIZQ9BYH8 718 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 PABPC1P11940 636 aaKnown RBP17.84■□□□□ 0.45
NPHP4-209ENST00000489180 TLK2Q86UE8 772 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 CACTIN-AS1Q8N1I8 211 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 WNT8BQ93098 351 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 PDGFDQ9GZP0 370 aaPredicted RBP17.84■□□□□ 0.45
NPHP4-209ENST00000489180 AHSPQ9NZD4 102 aa17.84■□□□□ 0.45
NPHP4-209ENST00000489180 COL9A3Q14050 684 aaPredicted RBP17.83■□□□□ 0.45
NPHP4-209ENST00000489180 MACC1Q6ZN28 852 aa17.83■□□□□ 0.45
NPHP4-209ENST00000489180 PARP8Q8N3A8 854 aa17.83■□□□□ 0.45
NPHP4-209ENST00000489180 ACTL7BQ9Y614 415 aa17.83■□□□□ 0.45
NPHP4-209ENST00000489180 BTNL10A8MVZ5 291 aa17.83■□□□□ 0.45
NPHP4-209ENST00000489180 PDHXO00330 501 aa17.83■□□□□ 0.45
NPHP4-209ENST00000489180 NELFEP18615 380 aaKnown RBP17.83■□□□□ 0.45
NPHP4-209ENST00000489180 MYL12AP19105 171 aa17.83■□□□□ 0.45
NPHP4-209ENST00000489180 NUP62P37198 522 aaPredicted RBP17.83■□□□□ 0.45
NPHP4-209ENST00000489180 ADCYAP1R1P41586 468 aa17.83■□□□□ 0.45
NPHP4-209ENST00000489180 CAMK1DQ8IU85 385 aa17.83■□□□□ 0.45
NPHP4-209ENST00000489180 ARHGEF3Q9NR81 526 aa17.83■□□□□ 0.45
NPHP4-209ENST00000489180 ZMYM2Q9UBW7 1377 aa17.83■□□□□ 0.45
NPHP4-209ENST00000489180 COL3A1P02461 1466 aaPredicted RBP17.83■□□□□ 0.44
NPHP4-209ENST00000489180 WNT7AO00755 349 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 IL2P60568 153 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 EVX2Q03828 476 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 ECM1Q16610 540 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 DET1Q7L5Y6 550 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 VAT1Q99536 393 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 REEP1Q9H902 201 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 BPIFA1Q9NP55 256 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 HES2Q9Y543 173 aa17.83■□□□□ 0.44
NPHP4-209ENST00000489180 SCAMP3O14828 347 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms