RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ARSBP15848 533 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 PRKCHP24723 683 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 CCKBRP32239 447 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 RPS6KA3P51812 740 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 PMS2P54278 862 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 GPS2Q13227 327 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 THOC5Q13769 683 aaKnown RBP3.98□□□□□ -1.77
RFC4-213ENST00000489028 PRKG1Q13976 671 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 GPR18Q14330 331 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 TAF5Q15542 800 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 TBC1D9BQ66K14 1250 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 RINLQ6ZS11 566 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 Q6ZSV7 163 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 DPP10Q8N608 796 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 HORMAD2Q8N7B1 307 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 PRR26Q8N8Z3 221 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 SCAIQ8N9R8 606 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 HDAC7Q8WUI4 952 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.98□□□□□ -1.77
RFC4-213ENST00000489028 KLHL31Q9H511 634 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 FEM1BQ9UK73 627 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 ICKQ9UPZ9 632 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 RAP2CQ9Y3L5 183 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 LRP12Q9Y561 859 aa3.98□□□□□ -1.77
RFC4-213ENST00000489028 TARSL2A2RTX5 802 aaKnown RBP3.97□□□□□ -1.77
RFC4-213ENST00000489028 DDTLA6NHG4 134 aaPredicted RBP3.97□□□□□ -1.77
RFC4-213ENST00000489028 STX16-NPEPL1H3BU86 382 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 STX16O14662 325 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 NBNO60934 754 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 PEX14O75381 377 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 TMCC1O94876 653 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 HLA-DQA2P01906 255 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 TK1P04183 234 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 CYP1A2P05177 515 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 NGFRP08138 427 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 PTPN9P43378 593 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 MTNR1AP48039 350 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 PPP3CCP48454 512 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 KRTAP10-9P60411 292 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 BIRC2Q13490 618 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 AP5B1Q2VPB7 878 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 DCAF12L2Q5VW00 463 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 TRILQ7L0X0 811 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 FAM185AQ8N0U4 392 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 AFG1LQ8WV93 481 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 FAR1Q8WVX9 515 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 APOLD1Q96LR9 279 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 CADM1Q9BY67 442 aaKnown RBP3.97□□□□□ -1.77
RFC4-213ENST00000489028 CTDSP1Q9GZU7 261 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 NCKIPSDQ9NZQ3 722 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 CDH22Q9UJ99 828 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 RAI2Q9Y5P3 530 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 PTGDR2Q9Y5Y4 395 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 COMMD10Q9Y6G5 202 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 SLC4A4Q9Y6R1 1079 aa3.97□□□□□ -1.77
RFC4-213ENST00000489028 MST1RQ04912 1400 aa3.96□□□□□ -1.77
RFC4-213ENST00000489028 hCG_1642624A0A1W2PR95 340 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 SPRY3O43610 288 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 LDB2O43679 373 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 TCEA3O75764 348 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 CLDN7O95471 211 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 METTL18O95568 372 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 CPA1P15085 419 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 CD72P21854 359 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 TNFRSF8P28908 595 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 CDC25AP30304 524 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 AVPR1AP37288 418 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 GRK6P43250 576 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 AARSP49588 968 aaKnown RBP eCLIP3.96□□□□□ -1.78
RFC4-213ENST00000489028 ABATP80404 500 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 Q0VFX4 171 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 OS9Q13438 667 aaPredicted RBP3.96□□□□□ -1.78
RFC4-213ENST00000489028 PDCD2Q16342 344 aaPredicted RBP3.96□□□□□ -1.78
RFC4-213ENST00000489028 ZNF284Q2VY69 593 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 RUNDC3AQ59EK9 446 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 SH2D4BQ5SQS7 431 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 ANO1Q5XXA6 986 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 KIAA1161Q6NSJ0 714 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 WDR5BQ86VZ2 330 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 CADM3Q8N126 398 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 FBXL14Q8N1E6 418 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 NKAPQ8N5F7 415 aaKnown RBP3.96□□□□□ -1.78
RFC4-213ENST00000489028 CEP76Q8TAP6 659 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 SDCCAG3Q96C92 435 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 RBM17Q96I25 401 aaKnown RBP3.96□□□□□ -1.78
RFC4-213ENST00000489028 ZPBPQ9BS86 351 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 FAM167BQ9BTA0 163 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 PAGR1Q9BTK6 254 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 SF3B5Q9BWJ5 86 aaKnown RBP3.96□□□□□ -1.78
RFC4-213ENST00000489028 CXorf56Q9H5V9 222 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 KIF17Q9P2E2 1029 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 NLKQ9UBE8 527 aa3.96□□□□□ -1.78
RFC4-213ENST00000489028 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.95□□□□□ -1.78
RFC4-213ENST00000489028 CLEC18AA5D8T8 446 aa3.95□□□□□ -1.78
RFC4-213ENST00000489028 TMEM247A6NEH6 219 aa3.95□□□□□ -1.78
RFC4-213ENST00000489028 LACTBL1A8MY62 500 aa3.95□□□□□ -1.78
RFC4-213ENST00000489028 HSPB6O14558 160 aa3.95□□□□□ -1.78
RFC4-213ENST00000489028 SEPT4O43236 478 aa3.95□□□□□ -1.78
RFC4-213ENST00000489028 SLC28A2O43868 658 aa3.95□□□□□ -1.78
RFC4-213ENST00000489028 RXRAP19793 462 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms