RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 MPP6Q9NZW5 540 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 CPSF2Q9P2I0 782 aaKnown RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 HECAQ9UBI9 543 aaPredicted RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 EXTL2Q9UBQ6 330 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 DNAJB11Q9UBS4 358 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 DRG1Q9Y295 367 aaKnown RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 ENTPD2Q9Y5L3 495 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 AOX1Q06278 1338 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 IGSF1Q8N6C5 1336 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 TRAV34A0A0B4J273 112 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 FAM237BA0A1B0GVD1 139 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 TCRBV7S2A1N4TA0A589 114 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 KRT87PA6NCN2 255 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 MBD3L5A6NJ08 208 aaPredicted RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 C16orf96A6NNT2 1141 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 TMEM110-MUSTN1A8MSY1 372 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 MPHOSPH10O00566 681 aaKnown RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 CD3EAPO15446 510 aaKnown RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 ZSCAN9O15535 394 aaPredicted RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 LMNAP02545 664 aaKnown RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 TPOP07202 933 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 WEE2P0C1S8 567 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 SUPT20HL2P0C7V6 817 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 COX7A2P14406 83 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 PRKCHP24723 683 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 MCM3P25205 808 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 PTPN7P35236 360 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 MSX2P35548 267 aaPredicted RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 CASP3P42574 277 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 SLC15A1P46059 708 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 LMAN1P49257 510 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 AMPHP49418 695 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 STAT5BP51692 787 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 TKTL1P51854 596 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 RRADP55042 308 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 RRP1P56182 461 aaKnown RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 FAM3BP58499 235 aaPredicted RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 SLC26A5P58743 744 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 TUBB4BP68371 445 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 OLR1P78380 273 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 SLFN5Q08AF3 891 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 KLHL30Q0D2K2 578 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 RPA4Q13156 261 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 SNTB1Q13884 538 aaKnown RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 TUBB2AQ13885 445 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 CAPSQ13938 189 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 HYAL4Q2M3T9 481 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 SUPT20HL1Q3ZLR7 823 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 SLC9B1Q4ZJI4 515 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 LRRC24Q50LG9 513 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 DCAF17Q5H9S7 520 aaPredicted RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 MFSD14BQ5SR56 506 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 CDC73Q6P1J9 531 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 FAM111BQ6SJ93 734 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 CCBE1Q6UXH8 406 aaPredicted RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 PIK3AP1Q6ZUJ8 805 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 ZER1Q7Z7L7 766 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 DSG4Q86SJ6 1040 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 ADGRG6Q86SQ4 1221 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 ZNF280BQ86YH2 543 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 ARHGAP12Q8IWW6 846 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 XXYLT1Q8NBI6 393 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 FAM46DQ8NEK8 389 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 TMIEQ8NEW7 156 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 TNIP2Q8NFZ5 429 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 PRR11Q96HE9 360 aaPredicted RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 C5orf34Q96MH7 638 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 DGAT2Q96PD7 388 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 MAP7D2Q96T17 732 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 CD180Q99467 661 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 NPAS1Q99742 590 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 NAA11Q9BSU3 229 aaPredicted RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 CRACR2AQ9BSW2 395 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 MLPHQ9BV36 600 aaPredicted RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 TUBB2BQ9BVA1 445 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 REXO4Q9GZR2 422 aaKnown RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 ZCWPW1Q9H0M4 648 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 NT5C3AQ9H0P0 336 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 MROH8Q9H579 483 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 IL1RAPL2Q9NP60 686 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 ARHGEF3Q9NR81 526 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 MRPS18AQ9NVS2 196 aaKnown RBP3.57□□□□□ -1.84
PRPF4-203ENST00000488937 ING3Q9NXR8 418 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 TAS2R3Q9NYW6 316 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 OSGIN1Q9UJX0 560 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 BAG5Q9UL15 447 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 OSGIN2Q9Y236 505 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 KLHL20Q9Y2M5 609 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 CLDN16Q9Y5I7 305 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 FPGT-TNNI3KV9GXZ4 949 aa3.57□□□□□ -1.84
PRPF4-203ENST00000488937 ADGRF5Q8IZF2 1346 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 CCDC187A0A096LP49 1063 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 TCRBV21S2A2A0A5A6 115 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 CAPN14A8MX76 684 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 KCNJ18B7U540 433 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 ADM5C9JUS6 153 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 CCDC188H7C350 402 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 K7EPI3 171 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 SYN3O14994 580 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 PGRMC2O15173 223 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms