RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 MAN2B1O00754 1011 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 PDGFBP01127 241 aaPredicted RBP19.81■□□□□ 0.76
CCM2-216ENST00000488727 MDH1P40925 334 aaKnown RBP19.81■□□□□ 0.76
CCM2-216ENST00000488727 COPS2P61201 443 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 GRAMD4Q6IC98 578 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 FSTL4Q6MZW2 842 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 ZNF852Q6ZMS4 543 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 RFX8Q6ZV50 586 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 CCDC50Q8IVM0 306 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 ZNF687Q8N1G0 1237 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 RAPGEF5Q92565 580 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 SNF8Q96H20 258 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 SHDQ96IW2 340 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 LMLNQ96KR4 655 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 TSPYL1Q9H0U9 437 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 TBC1D17Q9HA65 648 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 ARHGEF4Q9NR80 690 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 ABCB8Q9NUT2 735 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 NDFIP2Q9NV92 336 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 SLC27A6Q9Y2P4 619 aa19.81■□□□□ 0.76
CCM2-216ENST00000488727 MTF2Q9Y483 593 aaPredicted RBP19.81■□□□□ 0.76
CCM2-216ENST00000488727 CHD5Q8TDI0 1954 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.8■□□□□ 0.76
CCM2-216ENST00000488727 KAT7O95251 611 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 RHOQP17081 205 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 IL4RP24394 825 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 IVDP26440 423 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 CD70P32970 193 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 LMAN2Q12907 356 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 GEN1Q17RS7 908 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 FOXR1Q6PIV2 292 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 C1orf228Q6PIY5 440 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 TRMT10CQ7L0Y3 403 aaKnown RBP19.8■□□□□ 0.76
CCM2-216ENST00000488727 TERB1Q8NA31 727 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 ATG4AQ8WYN0 398 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 PGM2Q96G03 612 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 FOXQ1Q9C009 403 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 EPHX3Q9H6B9 360 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 LTB4R2Q9NPC1 389 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 TMEM248Q9NWD8 314 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 NDRG2Q9UN36 371 aaKnown RBP19.8■□□□□ 0.76
CCM2-216ENST00000488727 TBC1D30Q9Y2I9 924 aa19.8■□□□□ 0.76
CCM2-216ENST00000488727 R3HDM2Q9Y2K5 976 aaKnown RBP19.8■□□□□ 0.76
CCM2-216ENST00000488727 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.79■□□□□ 0.76
CCM2-216ENST00000488727 KANSL1LA0AUZ9 987 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 ANTXRLA6NF34 631 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 TP73O15350 636 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 TARSP26639 723 aaKnown RBP19.79■□□□□ 0.76
CCM2-216ENST00000488727 LSP1P33241 339 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 HTR7P34969 479 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 HCAR3P49019 387 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 PPP2R2AP63151 447 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 MMRN1Q13201 1228 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 ZNF177Q13360 481 aaPredicted RBP19.79■□□□□ 0.76
CCM2-216ENST00000488727 SNX1Q13596 522 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 DPYSQ14117 519 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 DPYSL3Q14195 570 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 KRT81Q14533 505 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 ZFYVE27Q5T4F4 411 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 DRICH1Q6PGQ1 229 aaPredicted RBP19.79■□□□□ 0.76
CCM2-216ENST00000488727 KCTD6Q8NC69 237 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 CSPG4P5Q96PW8 444 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 CENPHQ9H3R5 247 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 DDX56Q9NY93 547 aaKnown RBP19.79■□□□□ 0.76
CCM2-216ENST00000488727 ATG2BQ96BY7 2078 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 LRRD1A4D1F6 860 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 C3orf70A6NLC5 250 aaPredicted RBP19.79■□□□□ 0.76
CCM2-216ENST00000488727 PRRT4C9JH25 899 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 H3BRJ5 948 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 EGFP01133 1207 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 KRT1P04264 644 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 KDELR1P24390 212 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 ARL4AP40617 200 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 NUMBP49757 651 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 ZNF135P52742 658 aaPredicted RBP19.79■□□□□ 0.76
CCM2-216ENST00000488727 ADCY2Q08462 1091 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 PDK2Q15119 407 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 TMEM215Q68D42 235 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 KIAA0907Q7Z7F0 614 aaPredicted RBP19.79■□□□□ 0.76
CCM2-216ENST00000488727 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.79■□□□□ 0.76
CCM2-216ENST00000488727 RTL3Q8N8U3 475 aaKnown RBP19.79■□□□□ 0.76
CCM2-216ENST00000488727 BBOF1Q8ND07 529 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 CALN1Q9BXU9 219 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 ASIC3Q9UHC3 531 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 GGA2Q9UJY4 613 aa19.79■□□□□ 0.76
CCM2-216ENST00000488727 INTS6Q9UL03 887 aaKnown RBP19.79■□□□□ 0.76
CCM2-216ENST00000488727 NOVA2Q9UNW9 492 aaKnown RBP19.79■□□□□ 0.76
CCM2-216ENST00000488727 A0A0A0MRY4 1105 aa19.78■□□□□ 0.76
CCM2-216ENST00000488727 TMEM221A6NGB7 291 aa19.78■□□□□ 0.76
CCM2-216ENST00000488727 M0R296 226 aa19.78■□□□□ 0.76
CCM2-216ENST00000488727 FGF10O15520 208 aaPredicted RBP19.78■□□□□ 0.76
CCM2-216ENST00000488727 RIPK2O43353 540 aa19.78■□□□□ 0.76
CCM2-216ENST00000488727 SHBGP04278 402 aa19.78■□□□□ 0.76
CCM2-216ENST00000488727 PABPC1P11940 636 aaKnown RBP19.78■□□□□ 0.76
CCM2-216ENST00000488727 ERCC2P18074 760 aa19.78■□□□□ 0.76
CCM2-216ENST00000488727 OR1E1P30953 314 aa19.78■□□□□ 0.76
CCM2-216ENST00000488727 GRIA2P42262 883 aa19.78■□□□□ 0.76
CCM2-216ENST00000488727 LMNB2Q03252 620 aa19.78■□□□□ 0.76
CCM2-216ENST00000488727 BYSLQ13895 437 aaKnown RBP19.78■□□□□ 0.76
CCM2-216ENST00000488727 CCINQ13939 588 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms