RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 SLC13A4Q9UKG4 626 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 SLC8A2Q9UPR5 921 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 TARSL2A2RTX5 802 aaKnown RBP3.53□□□□□ -1.84
CD46-215ENST00000488596 FAM90A7PA6NKC0 464 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 SH2D7A6NKC9 451 aaPredicted RBP3.53□□□□□ -1.84
CD46-215ENST00000488596 FAM90A22PA8MWA6 464 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 FAM90A12PA8MX19 464 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 FAM90A23PA8MXZ1 464 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 KCNJ18B7U540 433 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 MSI1O43347 362 aaKnown RBP3.53□□□□□ -1.84
CD46-215ENST00000488596 METTL18O95568 372 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 IFIT1P09914 478 aaKnown RBP3.53□□□□□ -1.84
CD46-215ENST00000488596 FCGR2AP12318 317 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 TNNT1P13805 278 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 TFEBP19484 476 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 KLRC2P26717 231 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 CIITAP33076 1130 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 HNF1BP35680 557 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 GGT5P36269 586 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 PTPN9P43378 593 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 OAZ1P54368 228 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 RHAGQ02094 409 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 ZNF91Q05481 1191 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 GALNT2Q10471 571 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 GALNT3Q14435 633 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 IL13RA2Q14627 380 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 NAA25Q14CX7 972 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 KIAA1755Q5JYT7 1200 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 INTS11Q5TA45 600 aaKnown RBP3.53□□□□□ -1.84
CD46-215ENST00000488596 RETSATQ6NUM9 610 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 DLK2Q6UY11 383 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 KLBQ86Z14 1044 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 RBMXL3Q8N7X1 1067 aaKnown RBP3.53□□□□□ -1.84
CD46-215ENST00000488596 FAM47BQ8NA70 645 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 ZNF548Q8NEK5 533 aaPredicted RBP3.53□□□□□ -1.84
CD46-215ENST00000488596 RUFY2Q8WXA3 655 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 ST8SIA4Q92187 359 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 ZBTB10Q96DT7 871 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 LYZL4Q96KX0 146 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 PPM1MQ96MI6 270 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 CAMK1GQ96NX5 476 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 PIMREGQ9BSJ6 248 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.53□□□□□ -1.84
CD46-215ENST00000488596 PAIP1Q9H074 479 aaKnown RBP3.53□□□□□ -1.84
CD46-215ENST00000488596 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.53□□□□□ -1.84
CD46-215ENST00000488596 TTYH1Q9H313 450 aaPredicted RBP3.53□□□□□ -1.84
CD46-215ENST00000488596 AAMDCQ9H7C9 122 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 ZNF304Q9HCX3 659 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 UBN1Q9NPG3 1134 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 HEY2Q9UBP5 337 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 UPB1Q9UBR1 384 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 UTS2RQ9UKP6 389 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 ARHGAP26Q9UNA1 814 aa3.53□□□□□ -1.84
CD46-215ENST00000488596 H3BNX3 289 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 J3KRW8 73 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 CCNT1O60563 726 aaKnown RBP3.52□□□□□ -1.85
CD46-215ENST00000488596 TLR2O60603 784 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 CBX6O95503 412 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 WNT1P04628 370 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 PSG1P11464 419 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 CD53P19397 219 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 TNFAIP3P21580 790 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 MTNR1AP48039 350 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 SLC12A2P55011 1212 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 HSF1Q00613 529 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 CFHR1Q03591 330 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 SRSF1Q07955 248 aaKnown RBP eCLIP3.52□□□□□ -1.853e-6■□□□□ 8.3
CD46-215ENST00000488596 GOLGA8FQ08AF8 430 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 TBX2Q13207 712 aaPredicted RBP3.52□□□□□ -1.85
CD46-215ENST00000488596 ERV3-1Q14264 604 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 SLC9C1Q4G0N8 1177 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 SLC22A25Q6T423 547 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 FAM57BQ71RH2 274 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 B4GALNT4Q76KP1 1039 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 LRRC8DQ7L1W4 858 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 GALNT7Q86SF2 657 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 ADGRG6Q86SQ4 1221 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 TCP11L2Q8N4U5 519 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 SCAIQ8N9R8 606 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 NAXEQ8NCW5 288 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 LSM14AQ8ND56 463 aaKnown RBP3.52□□□□□ -1.85
CD46-215ENST00000488596 SETD9Q8NE22 299 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 WIPF2Q8TF74 440 aaPredicted RBP3.52□□□□□ -1.85
CD46-215ENST00000488596 NCSTNQ92542 709 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 RNF125Q96EQ8 232 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 APOPT1Q96IL0 206 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 MPP4Q96JB8 637 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 SLC26A6Q9BXS9 759 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 CADM1Q9BY67 442 aaKnown RBP3.52□□□□□ -1.85
CD46-215ENST00000488596 SLC32A1Q9H598 525 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 ERVK-5Q9HDB9 667 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 POT1Q9NUX5 634 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 TMEM45AQ9NWC5 275 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 ALKBH4Q9NXW9 302 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 NLKQ9UBE8 527 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 CNOT7Q9UIV1 285 aaKnown RBP3.52□□□□□ -1.85
CD46-215ENST00000488596 SUFUQ9UMX1 484 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 LAMP3Q9UQV4 416 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 SQORQ9Y6N5 450 aa3.52□□□□□ -1.85
CD46-215ENST00000488596 ZMYM2Q9UBW7 1377 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms