RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 DNAJC21Q5F1R6 531 aaKnown RBP12.99□□□□□ -0.33
NELFE-209ENST00000488426 PID1Q7Z2X4 250 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 RPRD1AQ96P16 312 aaPredicted RBP12.99□□□□□ -0.33
NELFE-209ENST00000488426 GBA3Q9H227 469 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 ZDHHC7Q9NXF8 308 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 DNMT3BQ9UBC3 853 aaKnown RBP12.99□□□□□ -0.33
NELFE-209ENST00000488426 SORCS3Q9UPU3 1222 aa12.99□□□□□ -0.33
NELFE-209ENST00000488426 C2orf78A6NCI8 922 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 ERI2A8K979 691 aaKnown RBP12.98□□□□□ -0.33
NELFE-209ENST00000488426 RASGRF2O14827 1237 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 MATN3O15232 486 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 MAFKO60675 156 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 OLFM2O95897 454 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 PSMB4P28070 264 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 MAGEA3P43357 314 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 LMAN1P49257 510 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 GABPB1Q06547 395 aaPredicted RBP12.98□□□□□ -0.33
NELFE-209ENST00000488426 ALFQ53S48 1182 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 GET4Q7L5D6 327 aaPredicted RBP12.98□□□□□ -0.33
NELFE-209ENST00000488426 OTOP3Q7RTS5 596 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 CAND1Q86VP6 1230 aaKnown RBP12.98□□□□□ -0.33
NELFE-209ENST00000488426 UHMK1Q8TAS1 419 aaKnown RBP12.98□□□□□ -0.33
NELFE-209ENST00000488426 FAM76AQ8TAV0 307 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 ITFG1Q8TB96 612 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 DEPDC1BQ8WUY9 529 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 IGSF8Q969P0 613 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 TEKT5Q96M29 485 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 DDX50Q9BQ39 737 aaKnown RBP12.98□□□□□ -0.33
NELFE-209ENST00000488426 RNF38Q9H0F5 515 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 STMN4Q9H169 189 aaPredicted RBP12.98□□□□□ -0.33
NELFE-209ENST00000488426 CENPHQ9H3R5 247 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 PPCSQ9HAB8 311 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 LRRC4CQ9HCJ2 640 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 NDFIP2Q9NV92 336 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 ZNF212Q9UDV6 495 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.98□□□□□ -0.33
NELFE-209ENST00000488426 TEX264Q9Y6I9 313 aa12.98□□□□□ -0.33
NELFE-209ENST00000488426 MYO18AQ92614 2054 aaKnown RBP12.98□□□□□ -0.33
NELFE-209ENST00000488426 ARHGAP42A6NI28 874 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 SPAG6O75602 509 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 PFKLP17858 780 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 CDC25CP30307 473 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 CORO1AP31146 461 aaKnown RBP12.97□□□□□ -0.33
NELFE-209ENST00000488426 PAPOLAP51003 745 aaKnown RBP12.97□□□□□ -0.33
NELFE-209ENST00000488426 IRAK1P51617 712 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 YBEYP58557 167 aaPredicted RBP12.97□□□□□ -0.33
NELFE-209ENST00000488426 ZBTB17Q13105 803 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 ANO4Q32M45 955 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 PARP15Q460N3 678 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 FAM133BQ5BKY9 247 aaKnown RBP12.97□□□□□ -0.33
NELFE-209ENST00000488426 RABGAP1LQ5R372 815 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 PPM1LQ5SGD2 360 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 TFAP2DQ7Z6R9 452 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 TMC8Q8IU68 726 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 ANKMY2Q8IV38 441 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 LGI2Q8N0V4 545 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 PLCD3Q8N3E9 789 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 FBXO36Q8NEA4 188 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 ZSCAN18Q8TBC5 510 aaPredicted RBP12.97□□□□□ -0.33
NELFE-209ENST00000488426 MRPS31Q92665 395 aaKnown RBP12.97□□□□□ -0.33
NELFE-209ENST00000488426 PPP1R2P1Q96PQ5 205 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 IL12RB2Q99665 862 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 WDR83Q9BRX9 315 aaKnown RBP12.97□□□□□ -0.33
NELFE-209ENST00000488426 LRRC3Q9BY71 257 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 CEP41Q9BYV8 373 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 NOL6Q9H6R4 1146 aaKnown RBP12.97□□□□□ -0.33
NELFE-209ENST00000488426 VPS37BQ9H9H4 285 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 RSPH14Q9UHP6 348 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 RGS16O15492 202 aaPredicted RBP12.97□□□□□ -0.33
NELFE-209ENST00000488426 ZBTB24O43167 697 aaPredicted RBP12.97□□□□□ -0.33
NELFE-209ENST00000488426 BANF1O75531 89 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 CNTN5O94779 1100 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 MBL2P11226 248 aaPredicted RBP12.97□□□□□ -0.33
NELFE-209ENST00000488426 LAMP2P13473 410 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 CCNB1P14635 433 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 GABRR2P28476 465 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 SYCP2LQ5T4T6 812 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 KCTD16Q68DU8 428 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 ZNF534Q76KX8 674 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 BMP8AQ7Z5Y6 402 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 DENND1CQ8IV53 801 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 RIBC1Q8N443 379 aaPredicted RBP12.97□□□□□ -0.33
NELFE-209ENST00000488426 EPS8L3Q8TE67 593 aaKnown RBP12.97□□□□□ -0.33
NELFE-209ENST00000488426 MAML1Q92585 1016 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 GCNAQ96QF7 691 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 FETUBQ9UGM5 382 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 DPP7Q9UHL4 492 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 STOML2Q9UJZ1 356 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 CACNA1HO95180 2353 aa12.97□□□□□ -0.33
NELFE-209ENST00000488426 GOLGA6L7A0A1B0GV03 622 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 RASA4BC9J798 803 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 PSMD3O43242 534 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 RASA4O43374 803 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 CACNG3O60359 315 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 RAMP2O60895 175 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 FGF19O95750 216 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 AGTP01019 485 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 JCHAINP01591 159 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 KLKB1P03952 638 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 GSTA2P09210 222 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms