RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 SERPINA13PQ6UXR4 307 aa14.34□□□□□ -0.11
NUP188-207ENST00000487952 LINGO4Q6UY18 593 aa14.34□□□□□ -0.11
NUP188-207ENST00000487952 LEKR1Q6ZMV7 388 aa14.34□□□□□ -0.11
NUP188-207ENST00000487952 ARHGAP36Q6ZRI8 547 aa14.34□□□□□ -0.11
NUP188-207ENST00000487952 CCDC13Q8IYE1 715 aa14.34□□□□□ -0.11
NUP188-207ENST00000487952 CHPFQ8IZ52 775 aa14.34□□□□□ -0.11
NUP188-207ENST00000487952 KCNV2Q8TDN2 545 aa14.34□□□□□ -0.11
NUP188-207ENST00000487952 CASKIN2Q8WXE0 1202 aa14.34□□□□□ -0.11
NUP188-207ENST00000487952 RPL10LQ96L21 214 aaKnown RBP14.34□□□□□ -0.11
NUP188-207ENST00000487952 ZNF599Q96NL3 588 aa14.34□□□□□ -0.11
NUP188-207ENST00000487952 OLFM3Q96PB7 478 aa14.34□□□□□ -0.11
NUP188-207ENST00000487952 TSGA13Q96PP4 275 aa14.34□□□□□ -0.11
NUP188-207ENST00000487952 QKIQ96PU8 341 aaKnown RBP eCLIP14.34□□□□□ -0.11
NUP188-207ENST00000487952 FAM118BQ9BPY3 351 aa14.34□□□□□ -0.11
NUP188-207ENST00000487952 LMAN1LQ9HAT1 526 aa14.34□□□□□ -0.11
NUP188-207ENST00000487952 HOMER3Q9NSC5 361 aa14.34□□□□□ -0.11
NUP188-207ENST00000487952 RBM12Q9NTZ6 932 aaKnown RBP14.34□□□□□ -0.11
NUP188-207ENST00000487952 HAUS2Q9NVX0 235 aa14.34□□□□□ -0.11
NUP188-207ENST00000487952 CXorf51AA0A1B0GTR3 108 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 KRIT1O00522 736 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 MTSS1O43312 755 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 MAFKO60675 156 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 RNF40O75150 1001 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 RBP3P10745 1247 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 CHRNB1P11230 501 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 STK19P49842 368 aaPredicted RBP14.33□□□□□ -0.12
NUP188-207ENST00000487952 SERPINH1P50454 418 aaKnown RBP14.33□□□□□ -0.12
NUP188-207ENST00000487952 CLCN6P51797 869 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 ZNF33AQ06730 810 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 PPIDQ08752 370 aaKnown RBP14.33□□□□□ -0.12
NUP188-207ENST00000487952 CCINQ13939 588 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 ZNF234Q14588 700 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 ZNF235Q14590 738 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 RFTN1Q14699 578 aaPredicted RBP14.33□□□□□ -0.12
NUP188-207ENST00000487952 HSF5Q4G112 596 aaPredicted RBP14.33□□□□□ -0.12
NUP188-207ENST00000487952 C2orf27AQ580R0 203 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 SLC45A4Q5BKX6 768 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 EMC10Q5UCC4 262 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 HEATR6Q6AI08 1181 aaKnown RBP14.33□□□□□ -0.12
NUP188-207ENST00000487952 SYNPOQ8N3V7 929 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 KDM1BQ8NB78 822 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 PJA1Q8NG27 643 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 ATG4AQ8WYN0 398 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 EZH1Q92800 747 aaPredicted RBP14.33□□□□□ -0.12
NUP188-207ENST00000487952 LGMNQ99538 433 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 CINPQ9BW66 212 aaPredicted RBP14.33□□□□□ -0.12
NUP188-207ENST00000487952 OSBPL6Q9BZF3 934 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 SMARCAL1Q9NZC9 954 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 SEPT10Q9P0V9 454 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 THAP10Q9P2Z0 257 aaPredicted RBP14.33□□□□□ -0.12
NUP188-207ENST00000487952 SEPT3Q9UH03 358 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 HS3ST2Q9Y278 367 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 R3HDM2Q9Y2K5 976 aaKnown RBP14.33□□□□□ -0.12
NUP188-207ENST00000487952 KIAA1549LQ6ZVL6 1849 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 TTC28Q96AY4 2481 aa14.33□□□□□ -0.12
NUP188-207ENST00000487952 UNC80Q8N2C7 3258 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 TMEM221A6NGB7 291 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 M0R296 226 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 MATN3O15232 486 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 STK10O94804 968 aaKnown RBP14.32□□□□□ -0.12
NUP188-207ENST00000487952 TMCC1O94876 653 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 KLF8O95600 359 aaPredicted RBP14.32□□□□□ -0.12
NUP188-207ENST00000487952 SRCP12931 536 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 HNRNPLP14866 589 aaKnown RBP eCLIP14.32□□□□□ -0.12
NUP188-207ENST00000487952 WASP42768 502 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 KIR2DL1P43626 348 aaPredicted RBP14.32□□□□□ -0.12
NUP188-207ENST00000487952 RECQLP46063 649 aaPredicted RBP14.32□□□□□ -0.12
NUP188-207ENST00000487952 RENBPP51606 427 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 CKAP4Q07065 602 aaKnown RBP14.32□□□□□ -0.12
NUP188-207ENST00000487952 SNX1Q13596 522 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 TUBB2AQ13885 445 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 LBRQ14739 615 aaKnown RBP14.32□□□□□ -0.12
NUP188-207ENST00000487952 INO80DQ53TQ3 878 aaPredicted RBP14.32□□□□□ -0.12
NUP188-207ENST00000487952 MARC1Q5VT66 337 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 B4GALNT4Q76KP1 1039 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 SH2D3CQ8N5H7 860 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 RPLP0P6Q8NHW5 317 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 USP33Q8TEY7 942 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 LRRN4Q8WUT4 740 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 C1orf54Q8WWF1 131 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 MRGPRX3Q96LB0 322 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 CCDC114Q96M63 670 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 TUBB2BQ9BVA1 445 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 AP1M1Q9BXS5 423 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 PDFQ9HBH1 243 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 ZDHHC4Q9NPG8 344 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 CACNA2D2Q9NY47 1150 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 SUN2Q9UH99 717 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 SLCO3A1Q9UIG8 710 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 CDC23Q9UJX2 597 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 ZNF148Q9UQR1 794 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 FCF1Q9Y324 198 aaKnown RBP14.32□□□□□ -0.12
NUP188-207ENST00000487952 SIT1Q9Y3P8 196 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 MTF2Q9Y483 593 aaPredicted RBP14.32□□□□□ -0.12
NUP188-207ENST00000487952 STON1Q9Y6Q2 735 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 MIA3Q5JRA6 1907 aa14.32□□□□□ -0.12
NUP188-207ENST00000487952 CFAP69A5D8W1 941 aa14.31□□□□□ -0.12
NUP188-207ENST00000487952 K7ERQ8 282 aa14.31□□□□□ -0.12
NUP188-207ENST00000487952 KCNK1O00180 336 aa14.31□□□□□ -0.12
NUP188-207ENST00000487952 LIASO43766 372 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms