RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 Q6ZWC4 215 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 CERS3Q8IU89 383 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 VN1R2Q8NFZ6 395 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 OR6J1Q8NGC5 347 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 MORC4Q8TE76 937 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 SCARB1Q8WTV0 552 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 OSCP1Q8WVF1 389 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 P2RX5Q93086 422 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 NEK1Q96PY6 1258 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 TAAR9Q96RI9 348 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 MESP1Q9BRJ9 268 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 FSD1LQ9BXM9 530 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 TRIM54Q9BYV2 358 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 USP44Q9H0E7 712 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 S1PR5Q9H228 398 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 ZMAT3Q9HA38 289 aaKnown RBP5.29□□□□□ -1.56
BRCA1-217ENST00000487825 A1CFQ9NQ94 594 aaKnown RBP5.29□□□□□ -1.56
BRCA1-217ENST00000487825 ANLNQ9NQW6 1124 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 DDX49Q9Y6V7 483 aaKnown RBP5.29□□□□□ -1.56
BRCA1-217ENST00000487825 LAMA1P25391 3075 aa5.29□□□□□ -1.56
BRCA1-217ENST00000487825 DOCK8Q8NF50 2099 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 TENM4Q6N022 2769 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 IL16Q14005 1332 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 VNN1O95497 513 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 LATS1O95835 1130 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 AKR1B1P15121 316 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 KELP23276 732 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 EPHB2P29323 1055 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 PDE6CP51160 858 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 OAZ1P54368 228 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 PRKAG1P54619 331 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 TPTEP56180 551 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 TUBA4AP68366 448 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 HOXA4Q00056 320 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-217ENST00000487825 KCNC3Q14003 757 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 RALBP1Q15311 655 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 MGAT5BQ3V5L5 792 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 PLA1AQ53H76 456 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 CEP78Q5JTW2 689 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 TMEM184AQ6ZMB5 413 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 ZNF783Q6ZMS7 281 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 EPM2AIP1Q7L775 607 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-217ENST00000487825 C1QL2Q7Z5L3 287 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 YTHDF3Q7Z739 585 aaKnown RBP5.28□□□□□ -1.56
BRCA1-217ENST00000487825 RBM23Q86U06 439 aaKnown RBP5.28□□□□□ -1.56
BRCA1-217ENST00000487825 LURAP1LQ8IV03 231 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 CPXCR1Q8N123 301 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 PNLDC1Q8NA58 520 aaKnown RBP5.28□□□□□ -1.56
BRCA1-217ENST00000487825 OR6B3Q8NGW1 331 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 RP9Q8TA86 221 aaKnown RBP5.28□□□□□ -1.56
BRCA1-217ENST00000487825 TMEM171Q8WVE6 324 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 DPCDQ9BVM2 203 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-217ENST00000487825 C1QTNF7Q9BXJ2 289 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 QTRT1Q9BXR0 403 aaKnown RBP5.28□□□□□ -1.56
BRCA1-217ENST00000487825 IFIH1Q9BYX4 1025 aaKnown RBP5.28□□□□□ -1.56
BRCA1-217ENST00000487825 MS4A7Q9GZW8 240 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-217ENST00000487825 CDH19Q9H159 772 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 ACAD9Q9H845 621 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 SLC38A10Q9HBR0 1119 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 RAVER2Q9HCJ3 691 aaKnown RBP5.28□□□□□ -1.56
BRCA1-217ENST00000487825 ERVK-5Q9HDB9 667 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 MYH15Q9Y2K3 1946 aa5.28□□□□□ -1.56
BRCA1-217ENST00000487825 TICRRQ7Z2Z1 1910 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 A0A087WWL8 130 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 TMEM233B4DJY2 109 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 PRRT4C9JH25 899 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 TBC1D4O60343 1298 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 UQCRFS1P1P0C7P4 283 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 XRCC6P12956 609 aaKnown RBP eCLIP5.27□□□□□ -1.57
BRCA1-217ENST00000487825 EEF2P13639 858 aaKnown RBP5.27□□□□□ -1.57
BRCA1-217ENST00000487825 DGKEP52429 567 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 ARFIP2P53365 341 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 GTF2H3Q13889 308 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 DUSP6Q16828 381 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 L1TD1Q5T7N2 865 aaKnown RBP5.27□□□□□ -1.57
BRCA1-217ENST00000487825 ZNF425Q6IV72 752 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 ANKRD54Q6NXT1 300 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 DPY19L3Q6ZPD9 716 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 CHSY1Q86X52 802 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 MIGA1Q8NAN2 632 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 SPPL3Q8TCT6 385 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 KBTBD7Q8WVZ9 684 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 SECISBP2LQ93073 1101 aaKnown RBP5.27□□□□□ -1.57
BRCA1-217ENST00000487825 CDCA3Q99618 268 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-217ENST00000487825 POMKQ9H5K3 350 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 GPR108Q9NPR9 543 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 NRIP3Q9NQ35 241 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 SWAP70Q9UH65 585 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 NOB1Q9ULX3 412 aaKnown RBP5.27□□□□□ -1.57
BRCA1-217ENST00000487825 DUSP12Q9UNI6 340 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 PA2G4Q9UQ80 394 aaKnown RBP5.27□□□□□ -1.57
BRCA1-217ENST00000487825 TBC1D30Q9Y2I9 924 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 SNX14Q9Y5W7 946 aa5.27□□□□□ -1.57
BRCA1-217ENST00000487825 SPAG17Q6Q759 2223 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 LOC102724159A0A0B4J2E5 919 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 TMEM8BA6NDV4 472 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 SRRM3A6NNA2 597 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-217ENST00000487825 PPP6CO00743 305 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 PER2O15055 1255 aa5.26□□□□□ -1.57
BRCA1-217ENST00000487825 EXOC3O60645 756 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms