RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 MAPRE1Q15691 268 aaKnown RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 GEN1Q17RS7 908 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 KIF19Q2TAC6 998 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 ZNF699Q32M78 642 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 DENND1BQ6P3S1 775 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 KCNT2Q6UVM3 1135 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 CHST15Q7LFX5 561 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 STRA8Q7Z7C7 330 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 CAND1Q86VP6 1230 aaKnown RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 SFRP1Q8N474 314 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 SNX31Q8N9S9 440 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 DNAAF3Q8N9W5 541 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 CHURC1Q8WUH1 139 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 ZNF516Q92618 1163 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 SDCCAG3Q96C92 435 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 NIF3L1Q9GZT8 377 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 UNC93B1Q9H1C4 597 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 POLR3FQ9H1D9 316 aaPredicted RBP6.34□□□□□ -1.39
VPS13D-209ENST00000487188 NMRAL1Q9HBL8 299 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 CISHQ9NSE2 258 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 CCDC167Q9P0B6 97 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 VPS28Q9UK41 221 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 B3GNT3Q9Y2A9 372 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 CORINQ9Y5Q5 1042 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 NOX1Q9Y5S8 564 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 CPQQ9Y646 472 aa6.34□□□□□ -1.39
VPS13D-209ENST00000487188 M0QYV0 167 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 TOR1BO14657 336 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 IDH3BO43837 385 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 TADA2AO75478 443 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 GRAP2O75791 330 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 TRUB2O95900 331 aaKnown RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 POLBP06746 335 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 GNAO1P09471 354 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 GPD1P21695 349 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SOX11P35716 441 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 GRIA4P48058 902 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 JAK3P52333 1124 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 NAGLUP54802 743 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 PDK2Q15119 407 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ARL13BQ3SXY8 428 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SLC51AQ86UW1 340 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 IFNEQ86WN2 208 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 HEATR4Q86WZ0 1026 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 DCLK2Q8N568 766 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 MCUQ8NE86 351 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 MCPH1Q8NEM0 835 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 MAGEE2Q8TD90 523 aaPredicted RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 S100ZQ8WXG8 99 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 CGRRF1Q99675 332 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 HGH1Q9BTY7 390 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 PSME2Q9UL46 239 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 AP4E1Q9UPM8 1137 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 V9GYQ6 96 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 DHRS12A0PJE2 317 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 TRIM64CA6NLI5 447 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SYCE1LA8MT33 242 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SLC22A2O15244 555 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 KCNQ2O43526 872 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 APOA4P06727 396 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ENO2P09104 434 aaPredicted RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 PGAM1P18669 254 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 TGM2P21980 687 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 GLDCP23378 1020 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ADSLP30566 484 aaPredicted RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 HPCAL1P37235 193 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 OPRL1P41146 370 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SLC7A2P52569 658 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 NFIAQ12857 509 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 PPIL2Q13356 520 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 NAB1Q13506 487 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 MTERF2Q49AM1 385 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 PTPN20Q4JDL3 420 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SEZ6Q53EL9 994 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SLFN12LQ6IEE8 588 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 NEPROQ6NW34 567 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SLCO6A1Q86UG4 719 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 CPXCR1Q8N123 301 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 TTC30BQ8N4P2 665 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 OR2T34Q8NGX1 318 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 OR2T3Q8NH03 318 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 HTRA1Q92743 480 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 GLMNQ92990 594 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ACDQ96AP0 544 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 GLT1D1Q96MS3 346 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ZNF347Q96SE7 839 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ZBED2Q9BTP6 218 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 MARCH7Q9H992 704 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 GIMAP4Q9NUV9 329 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 POU2F3Q9UKI9 436 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SLC39A10Q9ULF5 831 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 AP3B1O00203 1094 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 MFN2O95140 757 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 NAT1P18440 290 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 POLR2EP19388 210 aaKnown RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 MYF6P23409 242 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ADORA2AP29274 412 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 BAG6P46379 1132 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 HNRNPFP52597 415 aaKnown RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 PRKAA2P54646 552 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms