RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 IGLV3-10A0A075B6K4 115 aa25.14■■□□□ 1.62
LIME1-206ENST00000487026 RNF103O00237 685 aa25.14■■□□□ 1.62
LIME1-206ENST00000487026 SLC7A4O43246 635 aa25.14■■□□□ 1.62
LIME1-206ENST00000487026 DKK1O94907 266 aa25.14■■□□□ 1.62
LIME1-206ENST00000487026 OR1E1P30953 314 aa25.14■■□□□ 1.62
LIME1-206ENST00000487026 NAPEPLDQ6IQ20 393 aa25.14■■□□□ 1.62
LIME1-206ENST00000487026 BNIPLQ7Z465 357 aa25.14■■□□□ 1.62
LIME1-206ENST00000487026 CHST14Q8NCH0 376 aa25.14■■□□□ 1.62
LIME1-206ENST00000487026 OR2A12Q8NGT7 310 aa25.14■■□□□ 1.62
LIME1-206ENST00000487026 SLC30A5Q8TAD4 765 aa25.14■■□□□ 1.62
LIME1-206ENST00000487026 HAPLN3Q96S86 360 aa25.14■■□□□ 1.62
LIME1-206ENST00000487026 SPON2Q9BUD6 331 aa25.14■■□□□ 1.62
LIME1-206ENST00000487026 TNKS2Q9H2K2 1166 aa25.14■■□□□ 1.62
LIME1-206ENST00000487026 KDM4CQ9H3R0 1056 aa25.14■■□□□ 1.62
LIME1-206ENST00000487026 TP53BP1Q12888 1972 aaPredicted RBP25.14■■□□□ 1.61
LIME1-206ENST00000487026 PTPRBP23467 1997 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 FREM2Q5SZK8 3169 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 CBX4O00257 560 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 ENDOD1O94919 500 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 GJB6O95452 261 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 ITGAVP06756 1048 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 CHRNA3P32297 505 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 NXPH1P58417 271 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 TAS2R38P59533 333 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 FMO1Q01740 532 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 CDR2Q01850 454 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 SLC45A4Q5BKX6 768 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 C6orf118Q5T5N4 469 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 TMPRSS7Q7RTY8 843 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 SAP25Q8TEE9 199 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 FTSJ1Q9UET6 329 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 TPX2Q9ULW0 747 aaKnown RBP25.13■■□□□ 1.61
LIME1-206ENST00000487026 CA5BQ9Y2D0 317 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 FARP1Q9Y4F1 1045 aaPredicted RBP25.13■■□□□ 1.61
LIME1-206ENST00000487026 PKD1L2Q7Z442 2459 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 DOCK9Q9BZ29 2069 aa25.13■■□□□ 1.61
LIME1-206ENST00000487026 KPNA3O00505 521 aaPredicted RBP25.12■■□□□ 1.61
LIME1-206ENST00000487026 CYP1A1P04798 512 aaPredicted RBP25.12■■□□□ 1.61
LIME1-206ENST00000487026 SOX5P35711 763 aa25.12■■□□□ 1.61
LIME1-206ENST00000487026 JAM2P57087 298 aa25.12■■□□□ 1.61
LIME1-206ENST00000487026 BNIP3Q12983 259 aa25.12■■□□□ 1.61
LIME1-206ENST00000487026 CDO1Q16878 200 aa25.12■■□□□ 1.61
LIME1-206ENST00000487026 C15orf59Q2T9L4 293 aaPredicted RBP25.12■■□□□ 1.61
LIME1-206ENST00000487026 ZNF677Q86XU0 584 aa25.12■■□□□ 1.61
LIME1-206ENST00000487026 SPATS2Q86XZ4 545 aaKnown RBP25.12■■□□□ 1.61
LIME1-206ENST00000487026 DCAF4L2Q8NA75 395 aa25.12■■□□□ 1.61
LIME1-206ENST00000487026 KLK6Q92876 244 aa25.12■■□□□ 1.61
LIME1-206ENST00000487026 ARRDC3Q96B67 414 aa25.12■■□□□ 1.61
LIME1-206ENST00000487026 ZNF212Q9UDV6 495 aa25.12■■□□□ 1.61
LIME1-206ENST00000487026 RNGTTO60942 597 aaKnown RBP25.11■■□□□ 1.61
LIME1-206ENST00000487026 MMP8P22894 467 aa25.11■■□□□ 1.61
LIME1-206ENST00000487026 INAVAQ3KP66 663 aa25.11■■□□□ 1.61
LIME1-206ENST00000487026 FKBP15Q5T1M5 1219 aa25.11■■□□□ 1.61
LIME1-206ENST00000487026 PIP5KL1Q5T9C9 394 aa25.11■■□□□ 1.61
LIME1-206ENST00000487026 ARCQ7LC44 396 aa25.11■■□□□ 1.61
LIME1-206ENST00000487026 TRIM69Q86WT6 500 aa25.11■■□□□ 1.61
LIME1-206ENST00000487026 DRC7Q8IY82 874 aa25.11■■□□□ 1.61
LIME1-206ENST00000487026 EID2Q8N6I1 236 aa25.11■■□□□ 1.61
LIME1-206ENST00000487026 MFSD2AQ8NA29 543 aa25.11■■□□□ 1.61
LIME1-206ENST00000487026 RXFP2Q8WXD0 754 aa25.11■■□□□ 1.61
LIME1-206ENST00000487026 C11orf70Q9BRQ4 267 aa25.11■■□□□ 1.61
LIME1-206ENST00000487026 MAGEB5Q9BZ81 275 aa25.11■■□□□ 1.61
LIME1-206ENST00000487026 ZYG11BQ9C0D3 744 aa25.11■■□□□ 1.61
LIME1-206ENST00000487026 TMEM51Q9NW97 253 aa25.11■■□□□ 1.61
LIME1-206ENST00000487026 DSPP15924 2871 aaKnown RBP25.11■■□□□ 1.61
LIME1-206ENST00000487026 ILVBLA1L0T0 632 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 FAM149AA5PLN7 773 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 TPM2P07951 284 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 ANP32AP39687 249 aaKnown RBP25.1■■□□□ 1.61
LIME1-206ENST00000487026 STAT4Q14765 748 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 CCDC14Q49A88 953 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 ARSIQ5FYB1 569 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 ACBD5Q5T8D3 534 aaPredicted RBP25.1■■□□□ 1.61
LIME1-206ENST00000487026 C22orf39Q6P5X5 142 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 DHRS13Q6UX07 377 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 PROSER1Q86XN7 944 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 TMIEQ8NEW7 156 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 JOSD2Q8TAC2 188 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 MDM1Q8TC05 714 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 GRIN3AQ8TCU5 1115 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 CCDC114Q96M63 670 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 PCDHB18PQ96TA0 734 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 MYOCQ99972 504 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 SIK3Q9Y2K2 1263 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 ACTL7AQ9Y615 435 aa25.1■■□□□ 1.61
LIME1-206ENST00000487026 LAMA5O15230 3695 aa25.09■■□□□ 1.61
LIME1-206ENST00000487026 SLC31A1O15431 190 aa25.09■■□□□ 1.61
LIME1-206ENST00000487026 ZNF821O75541 412 aaPredicted RBP25.09■■□□□ 1.61
LIME1-206ENST00000487026 ZMPSTE24O75844 475 aa25.09■■□□□ 1.61
LIME1-206ENST00000487026 PRLRP16471 622 aa25.09■■□□□ 1.61
LIME1-206ENST00000487026 EPHA8P29322 1005 aaPredicted RBP25.09■■□□□ 1.61
LIME1-206ENST00000487026 ARRB1P49407 418 aaPredicted RBP25.09■■□□□ 1.61
LIME1-206ENST00000487026 COPB1P53618 953 aaKnown RBP25.09■■□□□ 1.61
LIME1-206ENST00000487026 DNAJC3Q13217 504 aa25.09■■□□□ 1.61
LIME1-206ENST00000487026 SETMARQ53H47 684 aaPredicted RBP25.09■■□□□ 1.61
LIME1-206ENST00000487026 DPY19L3Q6ZPD9 716 aa25.09■■□□□ 1.61
LIME1-206ENST00000487026 RBM43Q6ZSC3 357 aaKnown RBP25.09■■□□□ 1.61
LIME1-206ENST00000487026 CNDP2Q96KP4 475 aaKnown RBP25.09■■□□□ 1.61
LIME1-206ENST00000487026 PCMTD1Q96MG8 357 aaPredicted RBP25.09■■□□□ 1.61
LIME1-206ENST00000487026 CCDC86Q9H6F5 360 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms