RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	ERICH2	A1L162	156 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941		H3BQ06	376 aa	Predicted RBP	4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941		M0QYG6	137 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	FIBP	O43427	364 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	DCX	O43602	365 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	CYTH3	O43739	400 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	SOAT2	O75908	522 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	CHRNA1	P02708	482 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	RPLP2	P05387	115 aa	Known RBP	4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	HDC	P19113	662 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	SMARCA1	P28370	1054 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	NR4A2	P43354	598 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	GUCY2F	P51841	1108 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	ITK	Q08881	620 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	TROAP	Q12815	778 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	SLC35G1	Q2M3R5	365 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	PCID2	Q5JVF3	399 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	SLC9A4	Q6AI14	798 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	CYB5R4	Q7L1T6	521 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	SLC29A4	Q7RTT9	530 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	HEATR3	Q7Z4Q2	680 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	ADHFE1	Q8IWW8	467 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	CELF5	Q8N6W0	485 aa	Known RBP	4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	CYP2W1	Q8TAV3	490 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	RGMA	Q96B86	450 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	RITA1	Q96K30	269 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	C5orf34	Q96MH7	638 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	SLC46A1	Q96NT5	459 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	MAP3K14	Q99558	947 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	WAC	Q9BTA9	647 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	IFIH1	Q9BYX4	1025 aa	Known RBP	4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	UPF3B	Q9BZI7	483 aa	Known RBP	4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	MAN1C1	Q9NR34	630 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	HESX1	Q9UBX0	185 aa		4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	ZNF215	Q9UL58	517 aa	Predicted RBP	4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	MYH9	P35579	1960 aa	Known RBP	4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	PTPRZ1	P23471	2315 aa	Predicted RBP	4.49	□□□□□ -1.69
SNRNP40-205	ENST00000486941	CACNA1I	Q9P0X4	2223 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	KCNU1	A8MYU2	1149 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	MEIS2	O14770	477 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	IFIT3	O14879	490 aa	Known RBP	4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	IKBKB	O14920	756 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	NXPH3	O95157	252 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	BMP15	O95972	392 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	IGHD	P01880	384 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	FES	P07332	822 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	CYP21A2	P08686	494 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	LINC00271	P0C7V0	271 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	PIM1	P11309	404 aa	Predicted RBP	4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	ENG	P17813	658 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	PDC	P20941	246 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	CTNNB1	P35222	781 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	ARHGAP25	P42331	645 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	ALDH9A1	P49189	494 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	MAP2K6	P52564	334 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	KRTAP10-6	P60371	365 aa	Predicted RBP	4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	MGAT3	Q09327	533 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	FHL1	Q13642	323 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	LPIN1	Q14693	890 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	WTAP	Q15007	396 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	FCRL6	Q6DN72	434 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	CATIP	Q7Z7H3	387 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	GALNT16	Q8N428	558 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	NCOA7	Q8NI08	942 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	DENND1A	Q8TEH3	1009 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	RUFY2	Q8WXA3	655 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	SEPT1	Q8WYJ6	367 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	ATG4A	Q8WYN0	398 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	CUL5	Q93034	780 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	P2RX5	Q93086	422 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	ZNF689	Q96CS4	500 aa	Predicted RBP	4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	CDHR1	Q96JP9	859 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	LZTS2	Q9BRK4	669 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	THAP7	Q9BT49	309 aa	Predicted RBP	4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	SPZ1	Q9BXG8	430 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	FSD1L	Q9BXM9	530 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	IL25	Q9H293	177 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	SMARCAD1	Q9H4L7	1026 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	NRIP3	Q9NQ35	241 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	ANLN	Q9NQW6	1124 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	ERAP1	Q9NZ08	941 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	ZDHHC8	Q9ULC8	765 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	SQOR	Q9Y6N5	450 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	KIAA1671	Q9BY89	1806 aa		4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	RIF1	Q5UIP0	2472 aa	Known RBP	4.48	□□□□□ -1.69
SNRNP40-205	ENST00000486941	ADGRA3	Q8IWK6	1321 aa		4.47	□□□□□ -1.69
SNRNP40-205	ENST00000486941	TRIO	O75962	3097 aa		4.47	□□□□□ -1.69
SNRNP40-205	ENST00000486941	WDR81	Q562E7	1941 aa		4.47	□□□□□ -1.69
SNRNP40-205	ENST00000486941	GSTTP1	A0A1W2PQM5	241 aa		4.47	□□□□□ -1.69
SNRNP40-205	ENST00000486941	RRN3P2	A6NIE6	340 aa		4.47	□□□□□ -1.69
SNRNP40-205	ENST00000486941		E7EWF7	191 aa		4.47	□□□□□ -1.69
SNRNP40-205	ENST00000486941	SLC16A3	O15427	465 aa	Known RBP	4.47	□□□□□ -1.69
SNRNP40-205	ENST00000486941	MBTPS2	O43462	519 aa		4.47	□□□□□ -1.69
SNRNP40-205	ENST00000486941	ATP9A	O75110	1047 aa		4.47	□□□□□ -1.69
SNRNP40-205	ENST00000486941	MMP1	P03956	469 aa		4.47	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms