RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 HFE2Q6ZVN8 426 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 OTOP3Q7RTS5 596 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 LDB1Q86U70 411 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-211ENST00000486901 RYBPQ8N488 228 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-211ENST00000486901 SLC2A14Q8TDB8 520 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 NXNL1Q96CM4 212 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 VPS39Q96JC1 886 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 SERPINI1Q99574 410 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 TNFRSF12AQ9NP84 129 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 SOWAHBA6NEL2 793 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 M0QYT0 321 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 AURKAO14965 403 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 B4GALT4O60513 344 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 GCATO75600 419 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 GARSP41250 739 aaKnown RBP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 YBX1P67809 324 aaKnown RBP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 KIZQ2M2Z5 673 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 MGAT5BQ3V5L5 792 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 TMEM259Q4ZIN3 620 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 IER5Q5VY09 327 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 CLEC6AQ6EIG7 209 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 ZNF410Q86VK4 478 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 ITFG2Q969R8 447 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 SIKE1Q9BRV8 207 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 TUT1Q9H6E5 874 aaKnown RBP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 SNTG2Q9NY99 539 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 PGAP2Q9UHJ9 254 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 CDH2P19022 906 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 YWHAQP27348 245 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 CASP2P42575 452 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 MAGEA3P43357 314 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 RPL14P50914 215 aaKnown RBP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 AP3M2P53677 418 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 NAA20P61599 178 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 PLIN5Q00G26 463 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 ADIGQ0VDE8 80 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 FAM83AQ86UY5 434 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 REPS2Q8NFH8 660 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 DTNBP1Q96EV8 351 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 TMCO1Q9UM00 188 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 TBC1D30Q9Y2I9 924 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 SH3BP1Q9Y3L3 701 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 PRRC2BQ5JSZ5 2229 aaKnown RBP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 ZBTB42B2RXF5 422 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 GRID2O43424 1007 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 MT-CYBP00156 380 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 CHRM3P20309 590 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 SPRP35270 261 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 HARS2P49590 506 aaKnown RBP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 SEMA5AQ13591 1074 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 ATP1A4Q13733 1029 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 SEPT6Q14141 434 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 LDLRAP1Q5SW96 308 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 ACBD5Q5T8D3 534 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 FASTKD5Q7L8L6 764 aaKnown RBP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 KCNMB4Q86W47 210 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 HOMEZQ8IX15 550 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 NUP93Q8N1F7 819 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 FSTL5Q8N475 847 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 MARVELD2Q8N4S9 558 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 LPGAT1Q92604 370 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 EDEM1Q92611 657 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 ZMAT2Q96NC0 199 aaKnown RBP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 NIFKQ9BYG3 293 aaKnown RBP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 NAA50Q9GZZ1 169 aaKnown RBP12.59□□□□□ -0.39
HSPG2-211ENST00000486901 CDYLQ9Y232 598 aa12.59□□□□□ -0.39
HSPG2-211ENST00000486901 J3QRK9 145 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 HDAC3O15379 428 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 JCHAINP01591 159 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 DESP17661 470 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 MCCD1P59942 119 aaPredicted RBP12.58□□□□□ -0.4
HSPG2-211ENST00000486901 MBTD1Q05BQ5 628 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 GEN1Q17RS7 908 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 PIGGQ5H8A4 983 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 HABP4Q5JVS0 413 aaKnown RBP12.58□□□□□ -0.4
HSPG2-211ENST00000486901 ADGRG6Q86SQ4 1221 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 CYGBQ8WWM9 190 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 FBXL8Q96CD0 374 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 SIK2Q9H0K1 926 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 TIMM13Q9Y5L4 95 aaPredicted RBP12.58□□□□□ -0.4
HSPG2-211ENST00000486901 CEPT1Q9Y6K0 416 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 GRIA3P42263 894 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 SLC5A3P53794 718 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 CAPRIN1Q14444 709 aaKnown RBP12.58□□□□□ -0.4
HSPG2-211ENST00000486901 PLCL1Q15111 1095 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 LCLAT1Q6UWP7 414 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 C16orf89Q6UX73 402 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 MOB2Q70IA6 237 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 HERC6Q8IVU3 1022 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 LRRC39Q96DD0 335 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 OTUD5Q96G74 571 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 QKIQ96PU8 341 aaKnown RBP eCLIP12.58□□□□□ -0.4
HSPG2-211ENST00000486901 RBBP8Q99708 897 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 ZNF670Q9BS34 389 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 PAIP1Q9H074 479 aaKnown RBP12.58□□□□□ -0.4
HSPG2-211ENST00000486901 BFARQ9NZS9 450 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 AP4S1Q9Y587 144 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 PTPRFP10586 1907 aa12.58□□□□□ -0.4
HSPG2-211ENST00000486901 BEST1O76090 585 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms