RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 KDELR3O43731 214 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 VAV1P15498 845 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 GOT1P17174 413 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 ERCC2P18074 760 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 IL4RP24394 825 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 MAGEA1P43355 309 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 GEMIN4P57678 1058 aaKnown RBP13.45□□□□□ -0.26
SF1-216ENST00000486867 TAS2R40P59535 323 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 HADHQ16836 314 aaKnown RBP13.45□□□□□ -0.26
SF1-216ENST00000486867 KCNT1Q5JUK3 1230 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 LRRC38Q5VT99 294 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 RAD9BQ6WBX8 426 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 USP30Q70CQ3 517 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 CEP68Q76N32 757 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 VSIG1Q86XK7 387 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 CPNE8Q86YQ8 564 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 ARHGAP12Q8IWW6 846 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 PGBD3Q8N328 593 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 LZTR1Q8N653 840 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 FRMD1Q8N878 549 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 CSPG4P5Q96PW8 444 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 PCED1AQ9H1Q7 454 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 ZWILCHQ9H900 591 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 CD93Q9NPY3 652 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.45□□□□□ -0.26
SF1-216ENST00000486867 WSB2Q9NYS7 404 aaPredicted RBP13.45□□□□□ -0.26
SF1-216ENST00000486867 RAB23Q9ULC3 237 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 LRRK1Q38SD2 2015 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 KNL1Q8NG31 2342 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 ADAMTS9Q9P2N4 1935 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 RASA4BC9J798 803 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 H3BRJ5 948 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 K7ERQ8 282 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 CBX4O00257 560 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 PJA2O43164 708 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 RASA4O43374 803 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 SMAD6O43541 496 aaKnown RBP13.44□□□□□ -0.26
SF1-216ENST00000486867 RHOBTB1O94844 696 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 KRT7P08729 469 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 OXTRP30559 389 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 SPA17Q15506 151 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 ELF2Q15723 593 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 CST6Q15828 149 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 SMTNL2Q2TAL5 461 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 INO80DQ53TQ3 878 aaPredicted RBP13.44□□□□□ -0.26
SF1-216ENST00000486867 PPP6R3Q5H9R7 873 aaPredicted RBP13.44□□□□□ -0.26
SF1-216ENST00000486867 PLA2G2CQ5R387 149 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 PEAR1Q5VY43 1037 aaPredicted RBP13.44□□□□□ -0.26
SF1-216ENST00000486867 C22orf39Q6P5X5 142 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 KIAA1324Q6UXG2 1013 aaKnown RBP13.44□□□□□ -0.26
SF1-216ENST00000486867 PRR23BQ6ZRT6 265 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 STK40Q8N2I9 435 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 PCDH20Q8N6Y1 951 aaKnown RBP13.44□□□□□ -0.26
SF1-216ENST00000486867 NPWQ8N729 165 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 OR2A12Q8NGT7 310 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 CASKIN2Q8WXE0 1202 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 VOPP1Q96AW1 172 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 FAF2Q96CS3 445 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 HMCESQ96FZ2 354 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 CALR3Q96L12 384 aaKnown RBP13.44□□□□□ -0.26
SF1-216ENST00000486867 BAG1Q99933 345 aaPredicted RBP13.44□□□□□ -0.26
SF1-216ENST00000486867 SPON2Q9BUD6 331 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 PABPC3Q9H361 631 aaKnown RBP13.44□□□□□ -0.26
SF1-216ENST00000486867 PDFQ9HBH1 243 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 LUC7LQ9NQ29 371 aaKnown RBP13.44□□□□□ -0.26
SF1-216ENST00000486867 PPM1HQ9ULR3 514 aa13.44□□□□□ -0.26
SF1-216ENST00000486867 BCLAF3A2AJT9 711 aaKnown RBP13.43□□□□□ -0.26
SF1-216ENST00000486867 RCCD1A6NED2 376 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 ADH1BP00325 375 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 C5AR1P21730 350 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 CD6P30203 668 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 ARL4AP40617 200 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 SLC1A1P43005 524 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 GSDMDP57764 484 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 MESDQ14696 234 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 PDK2Q15119 407 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 IL31Q6EBC2 164 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 LINGO4Q6UY18 593 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 Q6ZVU0 165 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 LPCAT2Q7L5N7 544 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 ALYREFQ86V81 257 aaKnown RBP13.43□□□□□ -0.26
SF1-216ENST00000486867 ATP11CQ8NB49 1132 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 CADM4Q8NFZ8 388 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 OR8D1Q8WZ84 308 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 ERLEC1Q96DZ1 483 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 ZNF419Q96HQ0 510 aaPredicted RBP13.43□□□□□ -0.26
SF1-216ENST00000486867 ZNF670Q9BS34 389 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 FZD4Q9ULV1 537 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 HPCAL4Q9UM19 191 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 CYP8B1Q9UNU6 501 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 INVSQ9Y283 1065 aa13.43□□□□□ -0.26
SF1-216ENST00000486867 PRAMEF11O60813 436 aa13.42□□□□□ -0.26
SF1-216ENST00000486867 RNASEH1O60930 286 aaKnown RBP13.42□□□□□ -0.26
SF1-216ENST00000486867 GSRP00390 522 aa13.42□□□□□ -0.26
SF1-216ENST00000486867 DNTTP04053 509 aa13.42□□□□□ -0.26
SF1-216ENST00000486867 HOXD12P35452 270 aa13.42□□□□□ -0.26
SF1-216ENST00000486867 DRD3P35462 400 aa13.42□□□□□ -0.26
SF1-216ENST00000486867 NUMBP49757 651 aa13.42□□□□□ -0.26
SF1-216ENST00000486867 SFSWAPQ12872 951 aaKnown RBP13.42□□□□□ -0.26
SF1-216ENST00000486867 DPYSL3Q14195 570 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms