RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 NIF3L1Q9GZT8 377 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 FAM124BQ9H5Z6 455 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-209ENST00000486618 ARHGEF4Q9NR80 690 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 TMLHEQ9NVH6 421 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 KLHL11Q9NVR0 708 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 DDX43Q9NXZ2 648 aaKnown RBP7.1□□□□□ -1.27
HDAC3-209ENST00000486618 TRPM5Q9NZQ8 1165 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 TBC1D14Q9P2M4 693 aa7.1□□□□□ -1.27
HDAC3-209ENST00000486618 NBEAQ8NFP9 2946 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 A0A087X0B3 334 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 C2orf78A6NCI8 922 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 PRR19A6NJB7 356 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 F8VZ95 297 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 LEFTY2O00292 366 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 EIF4EBP3O60516 100 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-209ENST00000486618 IL18RAPO95256 599 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 CYP17A1P05093 508 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 CTSBP07858 339 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 DRD2P14416 443 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 CD9P21926 228 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 MAGEA11P43364 429 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 KIR2DL1P43626 348 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-209ENST00000486618 SLC6A11P48066 632 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 LHX1P48742 406 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 MAN2A2P49641 1150 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 ACOT2P49753 483 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 MXI1P50539 228 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 SLC12A3P55017 1021 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 ATP2C1P98194 919 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-209ENST00000486618 POSTNQ15063 836 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 GAB4Q2WGN9 574 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 EMC10Q5UCC4 262 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 BTBD8Q5XKL5 378 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 RETSATQ6NUM9 610 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 VSTM1Q6UX27 236 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 SPOCD1Q6ZMY3 1216 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 SPATS2Q86XZ4 545 aaKnown RBP7.09□□□□□ -1.27
HDAC3-209ENST00000486618 NAXDQ8IW45 347 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 PDCL2Q8N4E4 241 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 FAM184AQ8NB25 1140 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 CACTINQ8WUQ7 758 aaKnown RBP7.09□□□□□ -1.27
HDAC3-209ENST00000486618 CCDC74AQ96AQ1 378 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 ALKBH8Q96BT7 664 aaKnown RBP7.09□□□□□ -1.27
HDAC3-209ENST00000486618 LRIG1Q96JA1 1093 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 SPATA17Q96L03 361 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 LLPHQ9BRT6 129 aaKnown RBP7.09□□□□□ -1.27
HDAC3-209ENST00000486618 YIPF4Q9BSR8 244 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 ZDHHC5Q9C0B5 715 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 SLC7A5P2Q9GIP4 190 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 PARVGQ9HBI0 331 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 FSCN3Q9NQT6 498 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 ABCF3Q9NUQ8 709 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 PDP2Q9P2J9 529 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 DKK4Q9UBT3 224 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 GIMAP2Q9UG22 337 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 AGO2Q9UKV8 859 aaKnown RBP7.09□□□□□ -1.27
HDAC3-209ENST00000486618 EFR3BQ9Y2G0 817 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 SPEF1Q9Y4P9 236 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 ANGPTL3Q9Y5C1 460 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 PCDHB6Q9Y5E3 794 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 ITPR1Q14643 2758 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 PTPRBP23467 1997 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 PCDH15Q96QU1 1955 aa7.09□□□□□ -1.27
HDAC3-209ENST00000486618 NPHP3-ACAD11A0A0J9YXS1 232 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 TBC1D3BA6NDS4 549 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 ANTXRLA6NF34 631 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 KIAA1324LA8MWY0 1029 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-209ENST00000486618 SPTLC2O15270 562 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 NDUFS2O75306 463 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 GJB3O75712 270 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 IL33O95760 270 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 B3GALT4O96024 378 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 SLC4A1P02730 911 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 ADH5P11766 374 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 ACAT1P24752 427 aaKnown RBP7.08□□□□□ -1.28
HDAC3-209ENST00000486618 ANXA13P27216 316 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 MAOBP27338 520 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 GNL1P36915 607 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-209ENST00000486618 NEK4P51957 841 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 SLC7A9P82251 487 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 GTF2BQ00403 316 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 GAD2Q05329 585 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 RABEP1Q15276 862 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 RHBDF2Q6PJF5 856 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 DENND5BQ6ZUT9 1274 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 GLRX5Q86SX6 157 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.08□□□□□ -1.28
HDAC3-209ENST00000486618 DEFB119Q8N690 84 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 TOP6BLQ8N6T0 577 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 LRRC52Q8N7C0 313 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 PNPLA1Q8N8W4 532 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 OR2I1PQ8NGU4 316 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 MDM1Q8TC05 714 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 ZNF606Q8WXB4 792 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 OTUB2Q96DC9 234 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 HSPA12BQ96MM6 686 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 CAMK1GQ96NX5 476 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 PLIN2Q99541 437 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 REEP2Q9BRK0 252 aa7.08□□□□□ -1.28
HDAC3-209ENST00000486618 TRIM56Q9BRZ2 755 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms