RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 ZWILCHQ9H900 591 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 VPS45Q9NRW7 570 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 CHD5Q8TDI0 1954 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 TNRC6BQ9UPQ9 1833 aaKnown RBP18.59■□□□□ 0.57
COL1A1-207ENST00000486572 MID1O15344 667 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 DAPK3O43293 454 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 SMAD6O43541 496 aaKnown RBP18.59■□□□□ 0.57
COL1A1-207ENST00000486572 FOXD2O60548 495 aaPredicted RBP18.59■□□□□ 0.57
COL1A1-207ENST00000486572 ZNF806P0C7X5 589 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 GOT1P17174 413 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 DPP6P42658 865 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 YBEYP58557 167 aaPredicted RBP18.59■□□□□ 0.57
COL1A1-207ENST00000486572 SLC25A11Q02978 314 aaKnown RBP18.59■□□□□ 0.57
COL1A1-207ENST00000486572 ZNF33AQ06730 810 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 DPYSL2Q16555 572 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 PARP15Q460N3 678 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 KCNT1Q5JUK3 1230 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 PRR23CQ6ZRP0 262 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 ZNF354CQ86Y25 554 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 SLC41A1Q8IVJ1 513 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 CADM4Q8NFZ8 388 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 GANCQ8TET4 914 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 TEKT4Q8WW24 435 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 HSPH1Q92598 858 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 PIGKQ92643 395 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 ZNF419Q96HQ0 510 aaPredicted RBP18.59■□□□□ 0.57
COL1A1-207ENST00000486572 PANX2Q96RD6 677 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 GPR174Q9BXC1 333 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 CEP44Q9C0F1 390 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.59■□□□□ 0.57
COL1A1-207ENST00000486572 NCKAP1Q9Y2A7 1128 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 FARP1Q9Y4F1 1045 aaPredicted RBP18.59■□□□□ 0.57
COL1A1-207ENST00000486572 SDK1Q7Z5N4 2213 aa18.59■□□□□ 0.57
COL1A1-207ENST00000486572 H3BRJ5 948 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 MCF2LO15068 1137 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 BNIP3LO60238 219 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 PROSCO94903 275 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 IL1BP01584 269 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 RARAP10276 462 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 C5AR1P21730 350 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 ITPKAP23677 461 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 SLC8A1P32418 973 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 SSR1P43307 286 aaKnown RBP18.58■□□□□ 0.56
COL1A1-207ENST00000486572 HCAR3P49019 387 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 LMNB2Q03252 620 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 SYT12Q8IV01 421 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 RHOT2Q8IXI1 618 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 OR2A12Q8NGT7 310 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 OMDQ99983 421 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 BTBD1Q9H0C5 482 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 PCED1AQ9H1Q7 454 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 OSGEPQ9NPF4 335 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 FBXL12Q9NXK8 326 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 CWC15Q9P013 229 aaKnown RBP18.58■□□□□ 0.56
COL1A1-207ENST00000486572 INTUQ9ULD6 942 aa18.58■□□□□ 0.56
COL1A1-207ENST00000486572 ATXN2Q99700 1313 aaKnown RBP18.57■□□□□ 0.56
COL1A1-207ENST00000486572 A0A1W2PP55 124 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 ZSCAN5CA6NGD5 496 aaPredicted RBP18.57■□□□□ 0.56
COL1A1-207ENST00000486572 RASA4BC9J798 803 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 C1QTNF3-AMACRE9PGA6 284 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 RASA4O43374 803 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 KDELR3O43731 214 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 RNASEH2AO75792 299 aaKnown RBP18.57■□□□□ 0.56
COL1A1-207ENST00000486572 ERCC2P18074 760 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 ACSL1P33121 698 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 MAN1A1P33908 653 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 HOXD12P35452 270 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 ARL4AP40617 200 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 RECQLP46063 649 aaPredicted RBP18.57■□□□□ 0.56
COL1A1-207ENST00000486572 NDST2P52849 883 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 DPYSQ14117 519 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 HADHQ16836 314 aaKnown RBP18.57■□□□□ 0.56
COL1A1-207ENST00000486572 SYCP2LQ5T4T6 812 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 FAM46CQ5VWP2 391 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 PEAR1Q5VY43 1037 aaPredicted RBP18.57■□□□□ 0.56
COL1A1-207ENST00000486572 TXNRD3NBQ6F5E7 133 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 CCDC170Q8IYT3 715 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 AADATQ8N5Z0 425 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 PCDH20Q8N6Y1 951 aaKnown RBP18.57■□□□□ 0.56
COL1A1-207ENST00000486572 C12orf50Q8NA57 414 aaPredicted RBP18.57■□□□□ 0.56
COL1A1-207ENST00000486572 SLC35G2Q8TBE7 412 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 RFFLQ8WZ73 363 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 HMCESQ96FZ2 354 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 TNKS2Q9H2K2 1166 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 SMOC1Q9H4F8 434 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 LRRC19Q9H756 370 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 SGK2Q9HBY8 427 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 SERGEFQ9UGK8 458 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 PILRBQ9UKJ0 227 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 PPM1HQ9ULR3 514 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 FZD4Q9ULV1 537 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 FCF1Q9Y324 198 aaKnown RBP18.57■□□□□ 0.56
COL1A1-207ENST00000486572 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.57■□□□□ 0.56
COL1A1-207ENST00000486572 NUP205Q92621 2012 aa18.57■□□□□ 0.56
COL1A1-207ENST00000486572 MEI4A8MW99 385 aa18.56■□□□□ 0.56
COL1A1-207ENST00000486572 MTA2O94776 668 aa18.56■□□□□ 0.56
COL1A1-207ENST00000486572 SEMA4FO95754 770 aa18.56■□□□□ 0.56
COL1A1-207ENST00000486572 CD160O95971 181 aa18.56■□□□□ 0.56
COL1A1-207ENST00000486572 CDC25BP30305 580 aa18.56■□□□□ 0.56
COL1A1-207ENST00000486572 SERINC3Q13530 473 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms