RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 NCKIPSDQ9NZQ3 722 aa15.63■□□□□ 0.09
U2AF1-211ENST00000486519 SIRPGQ9P1W8 387 aa15.63■□□□□ 0.09
U2AF1-211ENST00000486519 TNRC6AQ8NDV7 1962 aaKnown RBP15.62■□□□□ 0.09
U2AF1-211ENST00000486519 PRR19A6NJB7 356 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 BNIP3LO60238 219 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 GABBR2O75899 941 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 HLA-DRAP01903 254 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 P4HA1P13674 534 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 PDE1CQ14123 709 aaPredicted RBP15.62■□□□□ 0.09
U2AF1-211ENST00000486519 ZACNQ401N2 412 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 MS4A13Q5J8X5 152 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 C1orf220Q5T0J3 134 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 C1QL3Q5VWW1 255 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 KYAT3Q6YP21 454 aaKnown RBP15.62■□□□□ 0.09
U2AF1-211ENST00000486519 NYAP1Q6ZVC0 841 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 OR52K2Q8NGK3 314 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 WDR48Q8TAF3 677 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 RNF139Q8WU17 664 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 STRADBQ9C0K7 418 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 PCDHB11Q9Y5F2 797 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 ADGRG4Q8IZF6 3080 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 ESPL1Q14674 2120 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 HIVEP3Q5T1R4 2406 aa15.62■□□□□ 0.09
U2AF1-211ENST00000486519 SETD2Q9BYW2 2564 aaPredicted RBP15.61■□□□□ 0.09
U2AF1-211ENST00000486519 CELSR1Q9NYQ6 3014 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 A0A1W2PQ27 194 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 A0A1W2PQ64 194 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 A0A1W2PQC6 194 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 H3BM21 787 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 EIF3DO15371 548 aaKnown RBP eCLIP15.61■□□□□ 0.09
U2AF1-211ENST00000486519 YY2O15391 372 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 NKX2-8O15522 239 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 IRAK2O43187 625 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 PDGFRAP16234 1089 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 ADIGQ0VDE8 80 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 PRRT3Q5FWE3 981 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 FAM46CQ5VWP2 391 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 NUGGCQ68CJ6 796 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 SV2AQ7L0J3 742 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 CCDC65Q8IXS2 484 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 FCRL2Q96LA5 508 aaPredicted RBP15.61■□□□□ 0.09
U2AF1-211ENST00000486519 GULP1Q9UBP9 304 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 FBXO2Q9UK22 296 aaPredicted RBP15.61■□□□□ 0.09
U2AF1-211ENST00000486519 TP53TG5Q9Y2B4 290 aa15.61■□□□□ 0.09
U2AF1-211ENST00000486519 CSMD2Q7Z408 3487 aa15.6■□□□□ 0.09
U2AF1-211ENST00000486519 WIPF3A6NGB9 483 aa15.6■□□□□ 0.09
U2AF1-211ENST00000486519 EXOC3O60645 756 aa15.6■□□□□ 0.09
U2AF1-211ENST00000486519 PCDH8O95206 1070 aa15.6■□□□□ 0.09
U2AF1-211ENST00000486519 PAK4O96013 591 aaPredicted RBP15.6■□□□□ 0.09
U2AF1-211ENST00000486519 CCL4P13236 92 aa15.6■□□□□ 0.09
U2AF1-211ENST00000486519 PIK3CAP42336 1068 aa15.6■□□□□ 0.09
U2AF1-211ENST00000486519 SLC11A2P49281 568 aa15.6■□□□□ 0.09
U2AF1-211ENST00000486519 ZFP36L1Q07352 338 aaKnown RBP15.6■□□□□ 0.09
U2AF1-211ENST00000486519 C16orf72Q14CZ0 275 aa15.6■□□□□ 0.09
U2AF1-211ENST00000486519 ACCSLQ4AC99 568 aa15.6■□□□□ 0.09
U2AF1-211ENST00000486519 MSANTD2Q6P1R3 559 aa15.6■□□□□ 0.09
U2AF1-211ENST00000486519 SFTPA2Q8IWL1 248 aa15.6■□□□□ 0.09
U2AF1-211ENST00000486519 SLC4A11Q8NBS3 891 aa15.6■□□□□ 0.09
U2AF1-211ENST00000486519 HEXIM2Q96MH2 286 aaKnown RBP15.6■□□□□ 0.09
U2AF1-211ENST00000486519 KLF6Q99612 283 aaPredicted RBP15.6■□□□□ 0.09
U2AF1-211ENST00000486519 LRRN3Q9H3W5 708 aa15.6■□□□□ 0.09
U2AF1-211ENST00000486519 CCDC39Q9UFE4 941 aa15.6■□□□□ 0.09
U2AF1-211ENST00000486519 APOBEC3BQ9UH17 382 aaKnown RBP15.6■□□□□ 0.09
U2AF1-211ENST00000486519 CLIC4Q9Y696 253 aa15.6■□□□□ 0.09
U2AF1-211ENST00000486519 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.59■□□□□ 0.09
U2AF1-211ENST00000486519 C1QTNF3-AMACRE9PGA6 284 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 PIK3R2O00459 728 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 MCF2LO15068 1137 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 MOCS3O95396 460 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 PRKAR1AP10644 381 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 TSHRP16473 764 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 RPIAP49247 311 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 TBX4P57082 545 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 DLG2Q15700 870 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 LACTB2Q53H82 288 aaPredicted RBP15.59■□□□□ 0.09
U2AF1-211ENST00000486519 ATP1A1-AS1Q5TC04 95 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 MAMDC2Q7Z304 686 aaPredicted RBP15.59■□□□□ 0.09
U2AF1-211ENST00000486519 PHACTR4Q8IZ21 702 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 LGI2Q8N0V4 545 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 ZNF557Q8N988 423 aaPredicted RBP15.59■□□□□ 0.09
U2AF1-211ENST00000486519 TMEM74Q96NL1 305 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 UBXN6Q9BZV1 441 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 HS3ST3A1Q9Y663 406 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 AKAP9Q99996 3911 aa15.59■□□□□ 0.09
U2AF1-211ENST00000486519 LMO7DNF2Z398 122 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 KPNA3O00505 521 aaPredicted RBP15.58■□□□□ 0.08
U2AF1-211ENST00000486519 ATP9BO43861 1147 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 MOCS2O96007 188 aaPredicted RBP15.58■□□□□ 0.08
U2AF1-211ENST00000486519 ZNF18P17022 549 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 NOS2P35228 1153 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 STAT6P42226 847 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 RAD23BP54727 409 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 KLRB1Q12918 225 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 GOLGA7BQ2TAP0 167 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 NEK5Q6P3R8 708 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 STXBP4Q6ZWJ1 553 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 DCP2Q8IU60 420 aaKnown RBP15.58■□□□□ 0.08
U2AF1-211ENST00000486519 C12orf56Q8IXR9 622 aa15.58■□□□□ 0.08
U2AF1-211ENST00000486519 Q8N9G6 341 aaPredicted RBP15.58■□□□□ 0.08
U2AF1-211ENST00000486519 CHST14Q8NCH0 376 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms