RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ZNF211Q13398 564 aaPredicted RBP11.63□□□□□ -0.55
NUP50-216ENST00000486184 FZD5Q13467 585 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 LLGL1Q15334 1064 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 PTPRNQ16849 979 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 SLC9A4Q6AI14 798 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 LINGO4Q6UY18 593 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 LRRC49Q8IUZ0 686 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 BBS5Q8N3I7 341 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 PQLC3Q8N755 202 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 TMEM105Q8N8V8 129 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 KDM1BQ8NB78 822 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 P3H4Q92791 437 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 CCDC114Q96M63 670 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 ACOX2Q99424 681 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 HEMGNQ9BXL5 484 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 ACE2Q9BYF1 805 aaPredicted RBP11.63□□□□□ -0.55
NUP50-216ENST00000486184 OSBPL8Q9BZF1 889 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 NOL6Q9H6R4 1146 aaKnown RBP11.63□□□□□ -0.55
NUP50-216ENST00000486184 HAUS2Q9NVX0 235 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 UBA2Q9UBT2 640 aaPredicted RBP11.63□□□□□ -0.55
NUP50-216ENST00000486184 SUN2Q9UH99 717 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 EFR3BQ9Y2G0 817 aa11.63□□□□□ -0.55
NUP50-216ENST00000486184 EDDM13A0A1B0GTR0 161 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 CXorf51AA0A1B0GTR3 108 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 SGK1O00141 431 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 ENC1O14682 589 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 BNIP3LO60238 219 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 ALDH1A2O94788 518 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 HLA-EP13747 358 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 AVPR2P30518 371 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 PTPN7P35236 360 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 CXCL12P48061 93 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 NR2C2P49116 596 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 SERPINH1P50454 418 aaKnown RBP11.62□□□□□ -0.55
NUP50-216ENST00000486184 DGKEP52429 567 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 ARF5P84085 180 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 GBE1Q04446 702 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 IL10RBQ08334 325 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 PDK1Q15118 436 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 TAZQ16635 292 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 AFMIDQ63HM1 303 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 TIGD7Q6NT04 549 aaPredicted RBP11.62□□□□□ -0.55
NUP50-216ENST00000486184 LEKR1Q6ZMV7 388 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 BBS12Q6ZW61 710 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 SYT13Q7L8C5 426 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 ARHGAP12Q8IWW6 846 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 SH2D3CQ8N5H7 860 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 PLD5Q8N7P1 536 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 DTWD2Q8NBA8 298 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 NETO2Q8NC67 525 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 CCNYQ8ND76 341 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 TSTD1Q8NFU3 115 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 CASKIN2Q8WXE0 1202 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 GABRG3Q99928 467 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 KLC2Q9H0B6 622 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 CARD9Q9H257 536 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 KCND1Q9NSA2 647 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 DLGAP2Q9P1A6 1054 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 BCCIPQ9P287 314 aaKnown RBP eCLIP11.62□□□□□ -0.55
NUP50-216ENST00000486184 IPO11Q9UI26 975 aaKnown RBP11.62□□□□□ -0.55
NUP50-216ENST00000486184 HS3ST2Q9Y278 367 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 ZKSCAN5Q9Y2L8 839 aa11.62□□□□□ -0.55
NUP50-216ENST00000486184 TCRBV21S2A2A0A5A6 115 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 ANTXRLA6NF34 631 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 TTC34A8MYJ7 566 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 WASH3PC4AMC7 463 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 APOC4-APOC2K7ER74 178 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 PRAMEF11O60813 436 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 RNASEH1O60930 286 aaKnown RBP11.61□□□□□ -0.55
NUP50-216ENST00000486184 ZMPSTE24O75844 475 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 MAP3K6O95382 1288 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 APOC2P02655 101 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 SRCP12931 536 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 PRKCHP24723 683 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 GARSP41250 739 aaKnown RBP11.61□□□□□ -0.55
NUP50-216ENST00000486184 RHOAP61586 193 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 GALNT2Q10471 571 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 ZNF235Q14590 738 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 DLG2Q15700 870 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 CRY1Q16526 586 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 HNRNPA1L2Q32P51 320 aaKnown RBP11.61□□□□□ -0.55
NUP50-216ENST00000486184 C22orf39Q6P5X5 142 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 PKN3Q6P5Z2 889 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 PGBD3Q8N328 593 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 C17orf53Q8N3J3 647 aaPredicted RBP11.61□□□□□ -0.55
NUP50-216ENST00000486184 RYBPQ8N488 228 aaPredicted RBP11.61□□□□□ -0.55
NUP50-216ENST00000486184 ZNF366Q8N895 744 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 TTC13Q8NBP0 860 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 HAUS1Q96CS2 278 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 ERLEC1Q96DZ1 483 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 MRGPRX3Q96LB0 322 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 FERMT1Q9BQL6 677 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 CINPQ9BW66 212 aaPredicted RBP11.61□□□□□ -0.55
NUP50-216ENST00000486184 TLR10Q9BXR5 811 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 CEP44Q9C0F1 390 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 BRD8Q9H0E9 1235 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 TMEM245Q9H330 911 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 FBRSQ9HAH7 460 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 C11orf16Q9NQ32 467 aa11.61□□□□□ -0.55
NUP50-216ENST00000486184 DTLQ9NZJ0 730 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms