RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 RNF139Q8WU17 664 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 ZNF606Q8WXB4 792 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 KCTD13Q8WZ19 329 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 PRCCQ92733 491 aaPredicted RBP9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 ARHGEF26Q96DR7 871 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 TMA16Q96EY4 203 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 MYO19Q96H55 970 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 LMLNQ96KR4 655 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 PRICKLE1Q96MT3 831 aaPredicted RBP9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 CDK5RAP1Q96SZ6 601 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 NUP85Q9BW27 656 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 LHX5Q9H2C1 402 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 SLC32A1Q9H598 525 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 OSGEPQ9NPF4 335 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 PRSS16Q9NQE7 514 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 DNAAF2Q9NVR5 837 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 HESX1Q9UBX0 185 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 TJP2Q9UDY2 1190 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 CNOT8Q9UFF9 292 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 CYTH4Q9UIA0 394 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 INTS6Q9UL03 887 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 NAALADL1Q9UQQ1 740 aa9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 FNDC3AQ9Y2H6 1198 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-208ENST00000486159 FAM170AA1A519 330 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 SRRM3A6NNA2 597 aaPredicted RBP9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 UPK3BL1B0FP48 263 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 UPK3BL2E5RIL1 263 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 IGLV3-27P01718 113 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 CAPNS1P04632 268 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 SYPP08247 313 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 PABPC1P11940 636 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 TNFRSF8P28908 595 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 MAN1A1P33908 653 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 HOXD12P35452 270 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 CTSOP43234 321 aaPredicted RBP9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 HARS2P49590 506 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 RPS14P62263 151 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 NOMO3P69849 1222 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 CAMK2GQ13555 558 aaPredicted RBP9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 TRIP6Q15654 476 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 ADGRF1Q5T601 910 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 PIK3R6Q5UE93 754 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 SYPL2Q5VXT5 272 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 MBLAC2Q68D91 279 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 MON1BQ7L1V2 547 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 METTL3Q86U44 580 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 SCUBE3Q8IX30 993 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 SIX6OS1Q8N1H7 587 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 OR2T3Q8NH03 318 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 UCMAQ8WVF2 138 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 SNX19Q92543 992 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 FCRL2Q96LA5 508 aaPredicted RBP9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 RUNDC3BQ96NL0 473 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 GAREM1Q9H706 876 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 ABCC13Q9NSE7 274 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 SERGEFQ9UGK8 458 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 GGA2Q9UJY4 613 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 STOML2Q9UJZ1 356 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 TMEM59LQ9UK28 342 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 BTBD3Q9Y2F9 522 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 HBS1LQ9Y450 684 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 ALG6Q9Y672 507 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 CACNA1EQ15878 2313 aa9.67□□□□□ -0.86
TMEM39A-208ENST00000486159 PLXNA2O75051 1894 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 USP9XQ93008 2570 aaPredicted RBP9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 GOLGA6L10A0A0M3HER8 536 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 A0A1B0GTW7 788 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 GOLGA8CPA6NN73 597 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 MYO1FO00160 1098 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 WNT9AO14904 365 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 BCAT2O15382 392 aaPredicted RBP9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 DDX3YO15523 660 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 CEP104O60308 925 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 ACSL4O60488 711 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 CBFA2T3O75081 653 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 ZRANB2O95218 330 aaKnown RBP eCLIP9.66□□□□□ -0.867e-6■■■■■ 37.3
TMEM39A-208ENST00000486159 IGLV3-19P01714 112 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 LTFP02788 710 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 RHOXF2BP0C7M4 288 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 FTH1P19P0C7X4 201 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 SETSIPP0DME0 302 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 ACADMP11310 421 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 MMP8P22894 467 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 CXCR5P32302 372 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 TBX4P57082 545 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 SLC8A3P57103 927 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 IL9RQ01113 521 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 PTP4A2Q12974 167 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 TAF5Q15542 800 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 CNGA2Q16280 664 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 HLA-BQ31612 363 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 WDR45BQ5MNZ6 344 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 SYCP2LQ5T4T6 812 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 NAA35Q5VZE5 725 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 PLEKHA7Q6IQ23 1121 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 C8orf74Q6P047 294 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 MSANTD2Q6P1R3 559 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 RAB44Q7Z6P3 723 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms