RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 OR2T34Q8NGX1 318 aa18.06■□□□□ 0.48
COL6A1-204ENST00000486023 TBC1D31Q96DN5 1066 aa18.06■□□□□ 0.48
COL6A1-204ENST00000486023 CCDC114Q96M63 670 aa18.06■□□□□ 0.48
COL6A1-204ENST00000486023 CAMK1GQ96NX5 476 aa18.06■□□□□ 0.48
COL6A1-204ENST00000486023 CNPY3Q9BT09 278 aa18.06■□□□□ 0.48
COL6A1-204ENST00000486023 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.06■□□□□ 0.48
COL6A1-204ENST00000486023 AASDHPPTQ9NRN7 309 aa18.06■□□□□ 0.48
COL6A1-204ENST00000486023 PARVAQ9NVD7 372 aa18.06■□□□□ 0.48
COL6A1-204ENST00000486023 PPARGC1AQ9UBK2 798 aaKnown RBP18.06■□□□□ 0.48
COL6A1-204ENST00000486023 FZD4Q9ULV1 537 aa18.06■□□□□ 0.48
COL6A1-204ENST00000486023 HS3ST2Q9Y278 367 aa18.06■□□□□ 0.48
COL6A1-204ENST00000486023 CNOT1A5YKK6 2376 aaKnown RBP18.05■□□□□ 0.48
COL6A1-204ENST00000486023 SPAARA0A1B0GVQ0 90 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 SH3BP5O60239 455 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 CSRP1P21291 193 aaKnown RBP18.05■□□□□ 0.48
COL6A1-204ENST00000486023 PSMA2P25787 234 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 CHRNA3P32297 505 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 ADPRHP54922 357 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 OGDHQ02218 1023 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 FOXC1Q12948 553 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 KIF19Q2TAC6 998 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 HLA-BQ31612 363 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 TDRD12Q587J7 1177 aaKnown RBP18.05■□□□□ 0.48
COL6A1-204ENST00000486023 ARSIQ5FYB1 569 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 ARTNQ5T4W7 220 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 RETSATQ6NUM9 610 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 TMC6Q7Z403 805 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 CHST14Q8NCH0 376 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 C1orf216Q8TAB5 229 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 GRIN3AQ8TCU5 1115 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 SETD7Q8WTS6 366 aaKnown RBP18.05■□□□□ 0.48
COL6A1-204ENST00000486023 SLC6A18Q96N87 628 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 ZDHHC5Q9C0B5 715 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 AIPL1Q9NZN9 384 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 IFNKQ9P0W0 207 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 PPM1HQ9ULR3 514 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 FCF1Q9Y324 198 aaKnown RBP18.05■□□□□ 0.48
COL6A1-204ENST00000486023 SNX11Q9Y5W9 270 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 CEP192Q8TEP8 1941 aa18.05■□□□□ 0.48
COL6A1-204ENST00000486023 NUMA1Q14980 2115 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 TCRBV5S1A1TA0A578 114 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 DDX3XO00571 662 aaKnown RBP eCLIP18.04■□□□□ 0.48
COL6A1-204ENST00000486023 C7P10643 843 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 CEACAM1P13688 526 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 EPHB2P29323 1055 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 DRD3P35462 400 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 VASPP50552 380 aaPredicted RBP18.04■□□□□ 0.48
COL6A1-204ENST00000486023 C21orf59P57076 290 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 BNC1Q01954 994 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 SEMA3BQ13214 749 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 MAMLD1Q13495 774 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 SKOR2Q2VWA4 1001 aaPredicted RBP18.04■□□□□ 0.48
COL6A1-204ENST00000486023 PPP1R15BQ5SWA1 713 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 PRAMEF14Q5SWL7 426 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 ZNF783Q6ZMS7 281 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 OR2A12Q8NGT7 310 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 NTAN1Q96AB6 310 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 SYT11Q9BT88 431 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 EBF2Q9HAK2 575 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 DYRK4Q9NR20 520 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 DNAAF2Q9NVR5 837 aaKnown RBP18.04■□□□□ 0.48
COL6A1-204ENST00000486023 GPATCH2LQ9NWQ4 482 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 ZNF212Q9UDV6 495 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 CNOT8Q9UFF9 292 aaKnown RBP18.04■□□□□ 0.48
COL6A1-204ENST00000486023 PCSK1NQ9UHG2 260 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 ADAMTS1Q9UHI8 967 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 HPCAL4Q9UM19 191 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 ANKRD6Q9Y2G4 727 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 PCDHB9Q9Y5E1 797 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 TNRC6BQ9UPQ9 1833 aaKnown RBP18.04■□□□□ 0.48
COL6A1-204ENST00000486023 ADAMTS9Q9P2N4 1935 aa18.04■□□□□ 0.48
COL6A1-204ENST00000486023 A0A1W2PPC4 97 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 RAMP2O60895 175 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 CER1O95813 267 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 CTSLP07711 333 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 CD59P13987 128 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 PPP2CBP62714 309 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 PPP2CAP67775 309 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 SIM1P81133 766 aaPredicted RBP18.03■□□□□ 0.48
COL6A1-204ENST00000486023 ARF5P84085 180 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 POLD3Q15054 466 aaPredicted RBP18.03■□□□□ 0.48
COL6A1-204ENST00000486023 NFKBIBQ15653 356 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 PPP1R2P3Q6NXS1 205 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 C22orf39Q6P5X5 142 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 IL27RAQ6UWB1 636 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 DPY19L3Q6ZPD9 716 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 NLRP14Q86W24 1093 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 NETO2Q8NC67 525 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 ZNF653Q96CK0 615 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 VCPIP1Q96JH7 1222 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 EDEM3Q9BZQ6 932 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 TM6SF2Q9BZW4 377 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 TTYH3Q9C0H2 523 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 TM7SF3Q9NS93 570 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 TMEM248Q9NWD8 314 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 IL36AQ9UHA7 158 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 FZD10Q9ULW2 581 aa18.03■□□□□ 0.48
COL6A1-204ENST00000486023 RNF103O00237 685 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 WNT9AO14904 365 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 ALOX15BO15296 676 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms