RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 ANKRD36A6QL64 1941 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 ARHGAP42A6NI28 874 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 J3KR12 359 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 DFFAO00273 331 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 ARNTLO00327 626 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 HOXC11O43248 304 aaPredicted RBP11.56□□□□□ -0.56
SND1-212ENST00000485871 ECI2O75521 394 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 GCATO75600 419 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 ZMPSTE24O75844 475 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 RHOCP08134 193 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 IL9P15248 144 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 ARSAP15289 507 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 PTPN3P26045 913 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 MZF1P28698 734 aaPredicted RBP11.56□□□□□ -0.56
SND1-212ENST00000485871 ECHS1P30084 290 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 GBP2P32456 591 aaPredicted RBP11.56□□□□□ -0.56
SND1-212ENST00000485871 HSPA9P38646 679 aaKnown RBP11.56□□□□□ -0.56
SND1-212ENST00000485871 RPL21P46778 160 aaKnown RBP11.56□□□□□ -0.56
SND1-212ENST00000485871 IFNAR2P48551 515 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 CARSP49589 748 aaKnown RBP11.56□□□□□ -0.56
SND1-212ENST00000485871 PLK1P53350 603 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 IFI35P80217 286 aaPredicted RBP11.56□□□□□ -0.56
SND1-212ENST00000485871 TNK2Q07912 1038 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 IL10RBQ08334 325 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 HTR4Q13639 388 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 HLTFQ14527 1009 aaKnown RBP eCLIP11.56□□□□□ -0.56
SND1-212ENST00000485871 POLD3Q15054 466 aaPredicted RBP11.56□□□□□ -0.56
SND1-212ENST00000485871 DHCR24Q15392 516 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 TRIP13Q15645 432 aaPredicted RBP11.56□□□□□ -0.56
SND1-212ENST00000485871 HEATR6Q6AI08 1181 aaKnown RBP11.56□□□□□ -0.56
SND1-212ENST00000485871 TRIM68Q6AZZ1 485 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 ASTLQ6HA08 431 aaPredicted RBP11.56□□□□□ -0.56
SND1-212ENST00000485871 LRIG3Q6UXM1 1119 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 KLHDC8BQ8IXV7 354 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 CARNMT1Q8N4J0 409 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 ATPAF2Q8N5M1 289 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 ST13P5Q8NFI4 369 aaPredicted RBP11.56□□□□□ -0.56
SND1-212ENST00000485871 DDI1Q8WTU0 396 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 RSAD2Q8WXG1 361 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 IFT81Q8WYA0 676 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 IL12RB2Q99665 862 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 HINFPQ9BQA5 517 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 DUS2Q9NX74 493 aaKnown RBP11.56□□□□□ -0.56
SND1-212ENST00000485871 PLK2Q9NYY3 685 aa11.56□□□□□ -0.56
SND1-212ENST00000485871 INTS6Q9UL03 887 aaKnown RBP11.56□□□□□ -0.56
SND1-212ENST00000485871 A0A0A0MRY4 1105 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 ESYT3A0FGR9 886 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 TYW5A2RUC4 315 aaKnown RBP11.55□□□□□ -0.56
SND1-212ENST00000485871 OTOL1A6NHN0 477 aaPredicted RBP11.55□□□□□ -0.56
SND1-212ENST00000485871 H0Y626 953 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 H3BQF6 201 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 KCNK1O00180 336 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 RNF103O00237 685 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 NDC80O14777 642 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 MATN3O15232 486 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 MTSS1O43312 755 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 KDELR3O43731 214 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 CACNG3O60359 315 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 PRAMEF11O60813 436 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 ZNF189O75820 626 aaPredicted RBP11.55□□□□□ -0.56
SND1-212ENST00000485871 CD160O95971 181 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 CYBBP04839 570 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 TYRP14679 529 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 GLDCP23378 1020 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 HLA-FP30511 346 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 CSKP41240 450 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 ARF5P84085 180 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 AP1B1Q10567 949 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 LMAN2Q12907 356 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 PPP1R7Q15435 360 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 PUS10Q3MIT2 529 aaKnown RBP11.55□□□□□ -0.56
SND1-212ENST00000485871 ANKRD20A2Q5SQ80 823 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 ANKRD20A1Q5TYW2 823 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 ANKRD20A3Q5VUR7 823 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 RNF219Q5W0B1 726 aaPredicted RBP11.55□□□□□ -0.56
SND1-212ENST00000485871 TIGD7Q6NT04 549 aaPredicted RBP11.55□□□□□ -0.56
SND1-212ENST00000485871 ZDHHC24Q6UX98 284 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 OTOP3Q7RTS5 596 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 CROCCP2Q86T23 111 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 MFN1Q8IWA4 741 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 ETFBKMTQ8IXQ9 262 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 ZNF567Q8N184 647 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 TEX26Q8N6G2 289 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 CNTD1Q8N815 330 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.55□□□□□ -0.56
SND1-212ENST00000485871 CCDC89Q8N998 374 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 CCNYQ8ND76 341 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 CCDC110Q8TBZ0 833 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 ZFYVE19Q96K21 471 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 SPATA13Q96N96 652 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 SH3GL2Q99962 352 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 KXD1Q9BQD3 176 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 GORASP1Q9BQQ3 440 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 FEM1AQ9BSK4 669 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 BBS2Q9BXC9 721 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 TSPYL1Q9H0U9 437 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 NEUROG2Q9H2A3 272 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 SNX24Q9Y343 169 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 MYO10Q9HD67 2058 aa11.55□□□□□ -0.56
SND1-212ENST00000485871 C2CD4DB7Z1M9 353 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms