RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 AQP12BA6NM10 295 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 DNPH1O43598 174 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 PLIN1O60240 522 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 IFIT2P09913 472 aaKnown RBP5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 HSPA1AP0DMV8 641 aaKnown RBP5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 HSPA1BP0DMV9 641 aaKnown RBP5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 CIITAP33076 1130 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 GRK5P34947 590 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 FOXL2P58012 376 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 SHC2P98077 582 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 MAP9Q49MG5 647 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 PIK3CD-AS1Q5SR53 167 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 C6orf10Q5SRN2 563 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 SMIM5Q71RC9 77 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 TRAPPC11Q7Z392 1133 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 EXD3Q8N9H8 876 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 SVIPQ8NHG7 77 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 WDR83Q9BRX9 315 aaKnown RBP5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 AAMDCQ9H7C9 122 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 RAB21Q9UL25 225 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 LAMP3Q9UQV4 416 aa5.15□□□□□ -1.59
SMARCC1-207ENST00000485833 DOT1LQ8TEK3 1739 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 N4BP2Q86UW6 1770 aaPredicted RBP5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 KIF28PB7ZC32 967 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 RHODO00212 210 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 ALPLP05186 524 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 CYP3A4P08684 503 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 ALDOCP09972 364 aaKnown RBP5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 TBXAS1P24557 533 aaPredicted RBP5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 HTR6P50406 440 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 FAM3BP58499 235 aaPredicted RBP5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 LVRNQ6Q4G3 990 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 TOM1L2Q6ZVM7 507 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 B4GALNT4Q76KP1 1039 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 PELI3Q8N2H9 469 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 FAM71BQ8TC56 605 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 FZD3Q9NPG1 666 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 ANAPC4Q9UJX5 808 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 MAGED2Q9UNF1 606 aaPredicted RBP5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 SLC12A4Q9UP95 1085 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 ACEP12821 1306 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 USP54Q70EL1 1684 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 POLR3AO14802 1390 aaPredicted RBP5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 ANKRD30BQ9BXX2 1392 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 USP6P35125 1406 aa5.14□□□□□ -1.59
SMARCC1-207ENST00000485833 CYP3A7-CYP3A51PA0A087WV96 503 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 FAM90A8PA6NJQ4 464 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 A6NNC1 897 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 SLC38A8A6NNN8 435 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 FFAR2O15552 330 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 NFATC1O95644 943 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 FAM90A13PP0C7W8 464 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 FAM90A24PP0C7X0 464 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 CHRNB1P11230 501 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 PEPDP12955 493 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 HOXB6P17509 224 aaKnown RBP5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 CYP3A7P24462 503 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 THBS3P49746 956 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 SF3A3Q12874 501 aaKnown RBP eCLIP5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 SPARCL1Q14515 664 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 TRIM60Q495X7 471 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 ASPHD1Q5U4P2 390 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 ZNF549Q6P9A3 640 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 CYB5R4Q7L1T6 521 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 TMEM199Q8N511 208 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 STYXQ8WUJ0 223 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 RSC1A1Q92681 617 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 ATP2A3Q93084 1043 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 MARK4Q96L34 752 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 MECRQ9BV79 373 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 OSBPL5Q9H0X9 879 aaPredicted RBP5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 MLXIPQ9HAP2 919 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 TXNRD2Q9NNW7 524 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 CHST12Q9NRB3 414 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 PKD1L3Q7Z443 1732 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 KIAA1210Q9ULL0 1709 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 BRD4O60885 1362 aaPredicted RBP5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 NSD2O96028 1365 aa5.13□□□□□ -1.59
SMARCC1-207ENST00000485833 TBC1D3DA0A087WVF3 549 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TBC1D3IA0A087WXS9 549 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TBC1D3EA0A087X179 549 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TBC1D3KA0A087X1G2 549 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TBC1D3BA6NDS4 549 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 FAM90A18PA6NE21 464 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TBC1D3FA6NER0 549 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 FAM90A16PA6NEW6 464 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 FAM90A9PA6NNJ1 464 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 FAM90A5PA8MXJ8 464 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TBC1D3LB9A6J9 549 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TOMM70O94826 608 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TNFRSF6BO95407 300 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 LARGE1O95461 756 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 FAM90A15PP0C7V4 464 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 FAM90A14PP0C7W9 464 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TBC1D3HP0C7X1 549 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TKTP29401 623 aaKnown RBP5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 POLD2P49005 469 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 GAD2Q05329 585 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 RNASELQ05823 741 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms